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The map label for this gene is cpcT4

Identifier: 37521107

GI number: 37521107

Start: 1660155

End: 1660706

Strand: Direct

Name: cpcT4

Synonym: glr1538

Alternate gene names: 37521107

Gene position: 1660155-1660706 (Clockwise)

Preceding gene: 37521106

Following gene: 37521110

Centisome position: 35.63

GC content: 63.22

Gene sequence:

>552_bases
ATGAGCGACTGGCAGACCGTGCGCACCTGGCTGGCGGGCACCTACTCCAACCGCGCCCAGGCGATGGCGGAGCCGGTCTG
GTTCATTCCGGTCACACTCTGGTATGTGGAAGTGGCCGGGCTCTTCGGCGAAGGGGCGGGCTTTTTTACCGAGCAGGTGA
GCGAGCACACCCCCAACCAGCCCTACCGCAGCCGGGTATTACAGTTGCTCGATAACCCCTTGCGGCTGGAGAATTATCGC
CTCAAAGACCAGAAAGTCTGGGCCGGGGCGGCAAAGGACCCAGAGCGTCTCGGGCGGCTGAGGGCGGACGACTGCGAGCA
GCTTCCCGGCTGCACGCTCTATCTGGAGCGCCGGGGGGAGACGTTCACGGGCAAGATGCAACCCGGAGGCGGCTGCCGTC
TTTTTCCCGGTGACGCCAGCTATGTCGAGATCGAATTTGAACTTGGCGAGCGGTTGTTTTTCACCCTCGACCGTGGCTTC
GAGGCCACTACCGGCGAGCAGACTTGGGGATCCCGGGCCGGGGCGTACCGATATTTGAAGCAGCTGCATTGA

Upstream 100 bases:

>100_bases
ACGTCGAGGGCCGCTGGGGGTTTCAAGACGCCTACTTGCTCTACCGCTTTACCAGCCCCGAGCAGATCGACCGGGTGGCC
CAACCGGCGGAGGACATGTA

Downstream 100 bases:

>100_bases
TGGGGCAGGCTACAGTCCGCCACGGCCTAGGGCAACTTCTACCACAGCGACAAAATCGCTGATGTGTCTGTGTCCACCGG
GCAATTAGCTTCGGAACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSDWQTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQPYRSRVLQLLDNPLRLENYR
LKDQKVWAGAAKDPERLGRLRADDCEQLPGCTLYLERRGETFTGKMQPGGGCRLFPGDASYVEIEFELGERLFFTLDRGF
EATTGEQTWGSRAGAYRYLKQLH

Sequences:

>Translated_183_residues
MSDWQTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQPYRSRVLQLLDNPLRLENYR
LKDQKVWAGAAKDPERLGRLRADDCEQLPGCTLYLERRGETFTGKMQPGGGCRLFPGDASYVEIEFELGERLFFTLDRGF
EATTGEQTWGSRAGAYRYLKQLH
>Mature_182_residues
SDWQTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQPYRSRVLQLLDNPLRLENYRL
KDQKVWAGAAKDPERLGRLRADDCEQLPGCTLYLERRGETFTGKMQPGGGCRLFPGDASYVEIEFELGERLFFTLDRGFE
ATTGEQTWGSRAGAYRYLKQLH

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPXT4_GLOVI (Q7NKE0)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924484.1
- GeneID:   2598612
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr1538
- NMPDR:   fig|251221.1.peg.1538
- HOGENOM:   HBG709119
- OMA:   KATWGAI
- ProtClustDB:   CLSK503015
- BioCyc:   GVIO251221:GLR1538-MONOMER
- HAMAP:   MF_01460
- InterPro:   IPR010404

Pfam domain/function: PF06206 DUF1001

EC number: NA

Molecular weight: Translated: 20926; Mature: 20795

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDWQTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQ
CCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
PYRSRVLQLLDNPLRLENYRLKDQKVWAGAAKDPERLGRLRADDCEQLPGCTLYLERRGE
HHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCHHHHCCCCCCHHHHCCCCEEEEEECCC
TFTGKMQPGGGCRLFPGDASYVEIEFELGERLFFTLDRGFEATTGEQTWGSRAGAYRYLK
EEEEEECCCCCEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
QLH
HCC
>Mature Secondary Structure 
SDWQTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQ
CHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
PYRSRVLQLLDNPLRLENYRLKDQKVWAGAAKDPERLGRLRADDCEQLPGCTLYLERRGE
HHHHHHHHHHCCCCCCCCEECCCCEEECCCCCCHHHHCCCCCCHHHHCCCCEEEEEECCC
TFTGKMQPGGGCRLFPGDASYVEIEFELGERLFFTLDRGFEATTGEQTWGSRAGAYRYLK
EEEEEECCCCCEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
QLH
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292