Click here to switch to the map view.

The map label for this gene is yjgJ [C]

Identifier: 37521110

GI number: 37521110

Start: 1662011

End: 1662592

Strand: Direct

Name: yjgJ [C]

Synonym: glr1541

Alternate gene names: 37521110

Gene position: 1662011-1662592 (Clockwise)

Preceding gene: 37521107

Following gene: 37521111

Centisome position: 35.67

GC content: 63.57

Gene sequence:

>582_bases
ATGGGCCGCCGCCGCATCATCGATCCCGAACAGATCATCCAGGCCACGCTGGTGGTTCTCTCCACCCACGGCGTGGAGGC
GGTGACCATTGCCCAGATTGCCAGGCAGGCGGGTATCTCCGAGGCATCGATTTACAAGTGCTTTGCCAGCAAGGAGGACT
TGCTGCGCGCCTGCATCAGCGAGAGCGTCGAGCCGCAGGAATTCTGGCGCAAGTTGTTTGCCCAGGGCGAGTCGCGGCCG
GTCAATGTCCTGCTGGAGGAAGCCGCCCTTTTCACGGTGCGCTACTACTGCCAGCATCTGCCCACCTTACTGCTGAGGGC
CTTGCGCCCGCAGGCGGACGATTGCTGCAGCGGTCCGCTGCAGACGATGAAGTTGCAGACGCACTACTTTCGGCTCGAAA
TCGAGCGTCGGCGCATCCGGCCGGGCGACCCTCAGCGCCTCTCAGCGGCTTTCTGCGGCCCGCTGTTCTATTACGTGTTT
ATCTCCCGGGCTTTTTTGGGCGGTGAGGCCCCTACTCCACCCGAGCAGTTCGCCCGCCAGTGGGCGCAGGACTTCTGGCA
GAGCGTCCGCCCGAACGCATGA

Upstream 100 bases:

>100_bases
CCAGGCGTCTACTCCTCAAGACAGGTTGTGCACACAGACCATTGACCCTGCCGCCTGGATCGTTTACAAATAATAAGTAA
GCACTCACTTATTTATTCCC

Downstream 100 bases:

>100_bases
GTTTTCCGCAAGTTTAATCTTTCGCTCAACGGCCGTCGCAGGGCGGTACTTAAGGAGGTTCCATGTTTGAGCAATTCAGC
CCGTCGGCTCTCCAGGTGCT

Product: TetR family transcriptional regulatory protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulatory Protein

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MGRRRIIDPEQIIQATLVVLSTHGVEAVTIAQIARQAGISEASIYKCFASKEDLLRACISESVEPQEFWRKLFAQGESRP
VNVLLEEAALFTVRYYCQHLPTLLLRALRPQADDCCSGPLQTMKLQTHYFRLEIERRRIRPGDPQRLSAAFCGPLFYYVF
ISRAFLGGEAPTPPEQFARQWAQDFWQSVRPNA

Sequences:

>Translated_193_residues
MGRRRIIDPEQIIQATLVVLSTHGVEAVTIAQIARQAGISEASIYKCFASKEDLLRACISESVEPQEFWRKLFAQGESRP
VNVLLEEAALFTVRYYCQHLPTLLLRALRPQADDCCSGPLQTMKLQTHYFRLEIERRRIRPGDPQRLSAAFCGPLFYYVF
ISRAFLGGEAPTPPEQFARQWAQDFWQSVRPNA
>Mature_192_residues
GRRRIIDPEQIIQATLVVLSTHGVEAVTIAQIARQAGISEASIYKCFASKEDLLRACISESVEPQEFWRKLFAQGESRPV
NVLLEEAALFTVRYYCQHLPTLLLRALRPQADDCCSGPLQTMKLQTHYFRLEIERRRIRPGDPQRLSAAFCGPLFYYVFI
SRAFLGGEAPTPPEQFARQWAQDFWQSVRPNA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22060; Mature: 21928

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRRIIDPEQIIQATLVVLSTHGVEAVTIAQIARQAGISEASIYKCFASKEDLLRACIS
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
ESVEPQEFWRKLFAQGESRPVNVLLEEAALFTVRYYCQHLPTLLLRALRPQADDCCSGPL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCH
QTMKLQTHYFRLEIERRRIRPGDPQRLSAAFCGPLFYYVFISRAFLGGEAPTPPEQFARQ
HHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
WAQDFWQSVRPNA
HHHHHHHHHCCCC
>Mature Secondary Structure 
GRRRIIDPEQIIQATLVVLSTHGVEAVTIAQIARQAGISEASIYKCFASKEDLLRACIS
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
ESVEPQEFWRKLFAQGESRPVNVLLEEAALFTVRYYCQHLPTLLLRALRPQADDCCSGPL
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCH
QTMKLQTHYFRLEIERRRIRPGDPQRLSAAFCGPLFYYVFISRAFLGGEAPTPPEQFARQ
HHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
WAQDFWQSVRPNA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA