Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is dipZ [H]
Identifier: 37519956
GI number: 37519956
Start: 408371
End: 410005
Strand: Reverse
Name: dipZ [H]
Synonym: gll0387
Alternate gene names: 37519956
Gene position: 410005-408371 (Counterclockwise)
Preceding gene: 37519958
Following gene: 37519953
Centisome position: 8.8
GC content: 62.32
Gene sequence:
>1635_bases ATGCCCGTTTGCACTGTCGAGTATAGGCCACCCGCCATTCGCAGTCCGCCCGTGCAGCCCGGGACAATCGCCCCACCGGT AAGCCATGCTGAAAGTGTGCCCATGGGAACCGCCGTGTCCAGCAAGACCCCCCGTGTCCGCGCCCCCGAGCTGCCCCCAA AATTTCACTGGCTCAACACCGACAGGCCCCTACGCCTGAAGGAACTGCGCGGCCGGGTCGTGCTGCTCGATTTTTGGACC TACTGCTGTATCAACTGTCTGCACATCTTGCCGGATCTCAAATACCTCGAGGACAAGTATCGCGACAGCCTCACGGTGAT CGGCGTGCACACCGCCAAATTTGCCAACGAGCAGGACCTGGACAATATCCGCCGGGCGATCTTGCGCCACGACATCGAGC ATCCGGTGATCGTCGATGAGAGCCACACCATCTGGCAGAGCTACACGGTCAGGGCCTGGCCGACGCTGGTGCTCATCGAC CCGGACGGTTACTACGTGGGCCACGCCTCCGGCGAGGGCAACCGCGACCTGCTCGATCAACTGATCGGCGAACTGGTTTT GCGCCAGACAAACCAGGGCCGCCCGCTGCCCGGTGGGTTGCGCACACGCCTTGAAAAAGCTTCCGCCCCGCCCACGCCCC TCGCCTTTCCCGGCAAACTCACCGTTTACGGCGATCGCCTGTTTGTCAGCGACAGCGGTCACCACCGCATCGTGACCAGC AGCCTGGACGGCTCCAGCCACGAGAGCATCGGCTCCGGCATCCCCGGCTGGCGCGACGGCAACTTCGAGGAGGCCGAATT TTGGGCTCCCCAGGGGCTGGCTCTTTCTGCGGACGGCCGCACGCTGTTCGTCTGCGACACCGAGAATCATCTGCTGCGCA AAATCGACCTGGTCCGCCGCCAGGTAAGCACCTTCGCAGGCACCGGCGAGCAGAGTCTGGGCTATGGCCAGGTCGAAGGG CCAGGTCTGGAGATTCCCCTCAATTCGCCCTGGGACGCAGTGGTGGCGGATGGAGCGCTCTACGTGGCGATGGCCGGTTC CCACCAGATCTGGAAGTGCGACCCGCATAGCGGCAGAATCAGCACCTTTGCCGGCAACGGCCACGAATCGACCCTGAACG GTACGCGCGACGGTTCCGCTTTCGCCCAACCGAGTGGGATCACTACCAATGATCACAGGTTGTTCGTCGCCGACTCCGAA AGCAGTTCCGTGCGTACCGTGGGCATTGCTGAAGATATCACCGCACTCCTGTGCGGCTCAGGCGACCTGTTCGGCTTTGG GGATCAAGACGGCTTAGGGGAAGCCGTGCTGTTGCAGCACCCGCTTGGGGTGCACTGGGACGGTGGAACTTTGTGGTTGA CCGACACCTACAACCACAAAATCAAGCGCATCGACCCCGAAAGTGGGCGGTGCGAGACTCTCACAGGCCACATCGACAGC GGCTATCTCGACGGCGACCTTGCCGAGGCGCGCTTCTGGGAGCCTGCCGGATTGTGGCGCAACGGCGATCGGATCTATAT TGCCGACACCAACAACCACGCCATCCGCGTTATCGACCTTGTCTCGCGTCGGGTCTCGACGCTCAAAATCCGCAATCTGT GCGCTCCTGGGTACTGCTTTCCTGATAGCGCTTAA
Upstream 100 bases:
>100_bases CGCGGGTGACATTCTCGAAGGTGAATTCCCGCGCGATAATCGACCGCCAGCCGTCGGTACCGAAGCGAATGGCCGTGCCT GCCATCGGTTGCTCTCCTGT
Downstream 100 bases:
>100_bases AACTCGATAGCCCTCGCTCTGGGCTCCTATGGATTCCACTAGCCAAACCTGTTTATGTAGCCCGTCTTTCTCTGATCTCT CGCCAGATCCCTCTAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MPVCTVEYRPPAIRSPPVQPGTIAPPVSHAESVPMGTAVSSKTPRVRAPELPPKFHWLNTDRPLRLKELRGRVVLLDFWT YCCINCLHILPDLKYLEDKYRDSLTVIGVHTAKFANEQDLDNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLID PDGYYVGHASGEGNRDLLDQLIGELVLRQTNQGRPLPGGLRTRLEKASAPPTPLAFPGKLTVYGDRLFVSDSGHHRIVTS SLDGSSHESIGSGIPGWRDGNFEEAEFWAPQGLALSADGRTLFVCDTENHLLRKIDLVRRQVSTFAGTGEQSLGYGQVEG PGLEIPLNSPWDAVVADGALYVAMAGSHQIWKCDPHSGRISTFAGNGHESTLNGTRDGSAFAQPSGITTNDHRLFVADSE SSSVRTVGIAEDITALLCGSGDLFGFGDQDGLGEAVLLQHPLGVHWDGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDS GYLDGDLAEARFWEPAGLWRNGDRIYIADTNNHAIRVIDLVSRRVSTLKIRNLCAPGYCFPDSA
Sequences:
>Translated_544_residues MPVCTVEYRPPAIRSPPVQPGTIAPPVSHAESVPMGTAVSSKTPRVRAPELPPKFHWLNTDRPLRLKELRGRVVLLDFWT YCCINCLHILPDLKYLEDKYRDSLTVIGVHTAKFANEQDLDNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLID PDGYYVGHASGEGNRDLLDQLIGELVLRQTNQGRPLPGGLRTRLEKASAPPTPLAFPGKLTVYGDRLFVSDSGHHRIVTS SLDGSSHESIGSGIPGWRDGNFEEAEFWAPQGLALSADGRTLFVCDTENHLLRKIDLVRRQVSTFAGTGEQSLGYGQVEG PGLEIPLNSPWDAVVADGALYVAMAGSHQIWKCDPHSGRISTFAGNGHESTLNGTRDGSAFAQPSGITTNDHRLFVADSE SSSVRTVGIAEDITALLCGSGDLFGFGDQDGLGEAVLLQHPLGVHWDGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDS GYLDGDLAEARFWEPAGLWRNGDRIYIADTNNHAIRVIDLVSRRVSTLKIRNLCAPGYCFPDSA >Mature_543_residues PVCTVEYRPPAIRSPPVQPGTIAPPVSHAESVPMGTAVSSKTPRVRAPELPPKFHWLNTDRPLRLKELRGRVVLLDFWTY CCINCLHILPDLKYLEDKYRDSLTVIGVHTAKFANEQDLDNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLIDP DGYYVGHASGEGNRDLLDQLIGELVLRQTNQGRPLPGGLRTRLEKASAPPTPLAFPGKLTVYGDRLFVSDSGHHRIVTSS LDGSSHESIGSGIPGWRDGNFEEAEFWAPQGLALSADGRTLFVCDTENHLLRKIDLVRRQVSTFAGTGEQSLGYGQVEGP GLEIPLNSPWDAVVADGALYVAMAGSHQIWKCDPHSGRISTFAGNGHESTLNGTRDGSAFAQPSGITTNDHRLFVADSES SSVRTVGIAEDITALLCGSGDLFGFGDQDGLGEAVLLQHPLGVHWDGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDSG YLDGDLAEARFWEPAGLWRNGDRIYIADTNNHAIRVIDLVSRRVSTLKIRNLCAPGYCFPDSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=524, Percent_Identity=43.3206106870229, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI116007528, Length=516, Percent_Identity=35.4651162790698, Blast_Score=283, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 59720; Mature: 59589
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVCTVEYRPPAIRSPPVQPGTIAPPVSHAESVPMGTAVSSKTPRVRAPELPPKFHWLNT CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC DRPLRLKELRGRVVLLDFWTYCCINCLHILPDLKYLEDKYRDSLTVIGVHTAKFANEQDL CCCEEHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEHHHCCCCCCH DNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLIDPDGYYVGHASGEGNRDLLDQ HHHHHHHHHHCCCCCEEECCCCEEEHEEEEEECCEEEEECCCCEEEECCCCCCCHHHHHH LIGELVLRQTNQGRPLPGGLRTRLEKASAPPTPLAFPGKLTVYGDRLFVSDSGHHRIVTS HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEECCCEEEEEECEEEEECCCCCEEEEE SLDGSSHESIGSGIPGWRDGNFEEAEFWAPQGLALSADGRTLFVCDTENHLLRKIDLVRR CCCCCCCHHHCCCCCCCCCCCCCCHHEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHH QVSTFAGTGEQSLGYGQVEGPGLEIPLNSPWDAVVADGALYVAMAGSHQIWKCDPHSGRI HHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCEEEEEEECCCCEEEECCCCCEE STFAGNGHESTLNGTRDGSAFAQPSGITTNDHRLFVADSESSSVRTVGIAEDITALLCGS EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHEEEECC GDLFGFGDQDGLGEAVLLQHPLGVHWDGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDS CCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCCC GYLDGDLAEARFWEPAGLWRNGDRIYIADTNNHAIRVIDLVSRRVSTLKIRNLCAPGYCF CCCCCCCCHHEECCCCCCEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC PDSA CCCC >Mature Secondary Structure PVCTVEYRPPAIRSPPVQPGTIAPPVSHAESVPMGTAVSSKTPRVRAPELPPKFHWLNT CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC DRPLRLKELRGRVVLLDFWTYCCINCLHILPDLKYLEDKYRDSLTVIGVHTAKFANEQDL CCCEEHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEEHHHCCCCCCH DNIRRAILRHDIEHPVIVDESHTIWQSYTVRAWPTLVLIDPDGYYVGHASGEGNRDLLDQ HHHHHHHHHHCCCCCEEECCCCEEEHEEEEEECCEEEEECCCCEEEECCCCCCCHHHHHH LIGELVLRQTNQGRPLPGGLRTRLEKASAPPTPLAFPGKLTVYGDRLFVSDSGHHRIVTS HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEECCCEEEEEECEEEEECCCCCEEEEE SLDGSSHESIGSGIPGWRDGNFEEAEFWAPQGLALSADGRTLFVCDTENHLLRKIDLVRR CCCCCCCHHHCCCCCCCCCCCCCCHHEECCCCEEEECCCCEEEEECCCHHHHHHHHHHHH QVSTFAGTGEQSLGYGQVEGPGLEIPLNSPWDAVVADGALYVAMAGSHQIWKCDPHSGRI HHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCEEEEEEECCCCEEEECCCCCEE STFAGNGHESTLNGTRDGSAFAQPSGITTNDHRLFVADSESSSVRTVGIAEDITALLCGS EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHEEEECC GDLFGFGDQDGLGEAVLLQHPLGVHWDGGTLWLTDTYNHKIKRIDPESGRCETLTGHIDS CCCCCCCCCCCCCCEEEEECCCCEEECCCEEEEEECCCCEEEEECCCCCCEEEEEECCCC GYLDGDLAEARFWEPAGLWRNGDRIYIADTNNHAIRVIDLVSRRVSTLKIRNLCAPGYCF CCCCCCCCHHEECCCCCCEECCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCC PDSA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]