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The map label for this gene is ybiL [C]

Identifier: 34498643

GI number: 34498643

Start: 3467747

End: 3470098

Strand: Direct

Name: ybiL [C]

Synonym: CV_3188

Alternate gene names: 34498643

Gene position: 3467747-3470098 (Clockwise)

Preceding gene: 34498641

Following gene: 34498646

Centisome position: 72.99

GC content: 63.9

Gene sequence:

>2352_bases
ATGAATAAAAAAGCATATTTGCGTCCTTTGGCTCTGGCCGTGCTCACCGCGCTCGCCAGCCAGGCCGCGCTCGCGGAGGA
AACCCAGCTGCAGACCGTCACCATCACCGGCGCCGGAGACAAGCTGGGAGTCGGCTTGCTGCAGCAGCAGGAAGGCGCGC
GCGCGCGCAGCGACGTCAGCAAGGCCGCGCTGGAGAAACAAAGCCCGACCTCGAACATCTACCAGGGCATCAACATGCTG
CCCGGCGTCAACGCCTCCAGCCAGGACAACACCGGCATGTTCGGCGGCGCGCTGACCATACGCGGCTTCAACTCCGATCA
GATCGGCGTCACCATCAACGGCGTGCCGGTCAACGACTCCGGCAGCTACAACGTCTACCCGCAGGAATTCGTCGATCTGG
AAAACCTGTGCCAGGGCTCGGTCACCCAGGGCTCCAGCGACACCGATGCGCCGCACATGGGCGCCAGCGGCGGCAATATG
AGCTTCGTCACCTGCGATCCGGAAAAAGAACGCCGCGTGCGATTTGCCCAGACCCTGGGCAGCAACAGCCTGCAACGCAC
CTATGTGCGCGGCGATACCGGCCTGTTCGCCGACGGCAAGGCGCGCGCCTTCGCCAGCTACTCGCACAGCGAAACCGACA
AGTGGAAAGGCGCCGGCGGCATGAAGCGCGACCACGTCGACACCGGCATCCGCTACGACTTCAGCGGCGGCTACATCAAC
GCGTCCGTGCTGTACAACCGCCAGATCGGCAACGCCTTCGGCACCCCGACGCTGCAGCAGCTGCAGCAGACCGGCTACGG
CTACGACTACTCCACCAGCTTCGTGCCGGGACACTTGCCGCCGAAGAACGGCACCGCGCAGAAGGAAACCGGGCCGACGC
CCGCCTACTACCAGCTGCAGCAGAACCCGTTCGAGAACGTGATCGCCAAGGTGGACGCCGTGCTGAAGCTGGGCCCCGAC
ACCCGCGTCAAGATCCAGCCCTACTTCTGGTACGGCTACGGCGGCGCCACCAGCCAGCAGACCCAGTCCGAAAGCGCCTT
CCTGAACAAGTCCGCCCATACCGACACGGCGGCCAGGGACCTGAACGGCGACGGCGATACGCTGGACACCATCGTGGTCA
ACGGCAGCAGCATCACCCGCACCCGCCGCCCGGGCATCACCGTCACCATGGAGCAGAGCCTGGGCAACCACCTGCTGCAG
GCCGGGGTCTGGTACGAGCGCGCCCAACACATCCAGACTGGACCGGAAAGCCTGACCAACGCCGACGGCAGCCCGCAGGA
CCCATGGATGCGGTCCGGCCTGATCACCCGTCCGGACGGCAGCTTGTACCAGTACCGCGACTGGGAAACCGTCAGCACCG
CCACCCAGCTGTTCGCCATCGGCACCTTCAATTTCCTGGACGACCGCCTCGGCATCAACGCCGGCCTGCGCACGCCGCAG
ATCAAGCGCGAGTTCACCAACCACGCCAACGAAGGCTGCGGCGCCTCCAGCAAGACCTGCGCGGCGGCCTACGATTACAC
CATCAGCAAAACCTACCGCGAAACCTTGCCCAGCTTCGGCATGCGCTATTATCTGACGCCCAAGCAGCAGGTATTCTTCA
ACATCACCAAGAACTACCGCGCGGTGCCCAACTACGCCTACAGCAGCAGCAACGGCAATGTGCAGGTGGTCAACGGCCAG
GTGGTGCTGAACAACGACGTGGTGCCGGAAACCTCGGTCAACACCGACCTGGGCTATCGCTGGCAGGGCGACATCGTCAC
GCTGAGCGGCTCCTTGTTCAACGTCGATTTCAGCAATCGCCAGGCCAATTCCTACGACCCGGTGACGCTGAAATCGGTGA
ACATCAATGCCGGCGGCGTACATACCTGGGGCGGCGAGATCGAGCTGGGCACCGTGCCGGTCAAGGGCTGGAGCGCCTAC
GCCTCGTTCACCAGCAACCACAGCGCAATCCAGAGCAACCTGAACTGGAAGGACGCGTCCGGCAGCAACACCGTGCTGCA
GACCCAGGGCAACGACTTCCCGATGACCCCGCGCTGGATGGCCGCGCTGTCGCTGCAGTACTCGCCGGGCGCTTGGTATG
TCCGCACCGACGTCAAGCACACCGGCAAGCAGTTCGCCACCCTAGTCAACGACGAGGTGGTGCCGGAATACACGACGGTG
GATCTGGATGCCGGCTACCGCTTCGGCAATATCGGCATGCTGAAGAATCCGACCATCAAGCTGAACGTCAGCAATATGTT
CAATACCAGCTACCGCATCCCGACCTCGTCCAAGGTCAACGCAGCCGACACCGTGCGTTACAACCTGGGCGCGCCCCGCA
GCGCGGCGGTGACGATGCAGGTCGATCTGTAG

Upstream 100 bases:

>100_bases
GCAACGATAGCCGTAAAACCCATGCCTTGCGGCAGGGGAACGGCTGCGCAGAAAACACAAACGATTTAAAAATTGATTTC
TCTACAAATCAGGAAATTCA

Downstream 100 bases:

>100_bases
CTCCGGCAGCGGACGCTATCCAAAAGCCGGGCGAAAGCCCGGCTTTTTTCTTGTTTCCAGAAGTGATGAAGGCGCCGCGC
CCCACTGAACGGCCAGATGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Receptor Protein; NB Dependent Receptor Protein; Outer Membrane Heme Receptor; NB-Dependent Siderophore Receptor

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MNKKAYLRPLALAVLTALASQAALAEETQLQTVTITGAGDKLGVGLLQQQEGARARSDVSKAALEKQSPTSNIYQGINML
PGVNASSQDNTGMFGGALTIRGFNSDQIGVTINGVPVNDSGSYNVYPQEFVDLENLCQGSVTQGSSDTDAPHMGASGGNM
SFVTCDPEKERRVRFAQTLGSNSLQRTYVRGDTGLFADGKARAFASYSHSETDKWKGAGGMKRDHVDTGIRYDFSGGYIN
ASVLYNRQIGNAFGTPTLQQLQQTGYGYDYSTSFVPGHLPPKNGTAQKETGPTPAYYQLQQNPFENVIAKVDAVLKLGPD
TRVKIQPYFWYGYGGATSQQTQSESAFLNKSAHTDTAARDLNGDGDTLDTIVVNGSSITRTRRPGITVTMEQSLGNHLLQ
AGVWYERAQHIQTGPESLTNADGSPQDPWMRSGLITRPDGSLYQYRDWETVSTATQLFAIGTFNFLDDRLGINAGLRTPQ
IKREFTNHANEGCGASSKTCAAAYDYTISKTYRETLPSFGMRYYLTPKQQVFFNITKNYRAVPNYAYSSSNGNVQVVNGQ
VVLNNDVVPETSVNTDLGYRWQGDIVTLSGSLFNVDFSNRQANSYDPVTLKSVNINAGGVHTWGGEIELGTVPVKGWSAY
ASFTSNHSAIQSNLNWKDASGSNTVLQTQGNDFPMTPRWMAALSLQYSPGAWYVRTDVKHTGKQFATLVNDEVVPEYTTV
DLDAGYRFGNIGMLKNPTIKLNVSNMFNTSYRIPTSSKVNAADTVRYNLGAPRSAAVTMQVDL

Sequences:

>Translated_783_residues
MNKKAYLRPLALAVLTALASQAALAEETQLQTVTITGAGDKLGVGLLQQQEGARARSDVSKAALEKQSPTSNIYQGINML
PGVNASSQDNTGMFGGALTIRGFNSDQIGVTINGVPVNDSGSYNVYPQEFVDLENLCQGSVTQGSSDTDAPHMGASGGNM
SFVTCDPEKERRVRFAQTLGSNSLQRTYVRGDTGLFADGKARAFASYSHSETDKWKGAGGMKRDHVDTGIRYDFSGGYIN
ASVLYNRQIGNAFGTPTLQQLQQTGYGYDYSTSFVPGHLPPKNGTAQKETGPTPAYYQLQQNPFENVIAKVDAVLKLGPD
TRVKIQPYFWYGYGGATSQQTQSESAFLNKSAHTDTAARDLNGDGDTLDTIVVNGSSITRTRRPGITVTMEQSLGNHLLQ
AGVWYERAQHIQTGPESLTNADGSPQDPWMRSGLITRPDGSLYQYRDWETVSTATQLFAIGTFNFLDDRLGINAGLRTPQ
IKREFTNHANEGCGASSKTCAAAYDYTISKTYRETLPSFGMRYYLTPKQQVFFNITKNYRAVPNYAYSSSNGNVQVVNGQ
VVLNNDVVPETSVNTDLGYRWQGDIVTLSGSLFNVDFSNRQANSYDPVTLKSVNINAGGVHTWGGEIELGTVPVKGWSAY
ASFTSNHSAIQSNLNWKDASGSNTVLQTQGNDFPMTPRWMAALSLQYSPGAWYVRTDVKHTGKQFATLVNDEVVPEYTTV
DLDAGYRFGNIGMLKNPTIKLNVSNMFNTSYRIPTSSKVNAADTVRYNLGAPRSAAVTMQVDL
>Mature_783_residues
MNKKAYLRPLALAVLTALASQAALAEETQLQTVTITGAGDKLGVGLLQQQEGARARSDVSKAALEKQSPTSNIYQGINML
PGVNASSQDNTGMFGGALTIRGFNSDQIGVTINGVPVNDSGSYNVYPQEFVDLENLCQGSVTQGSSDTDAPHMGASGGNM
SFVTCDPEKERRVRFAQTLGSNSLQRTYVRGDTGLFADGKARAFASYSHSETDKWKGAGGMKRDHVDTGIRYDFSGGYIN
ASVLYNRQIGNAFGTPTLQQLQQTGYGYDYSTSFVPGHLPPKNGTAQKETGPTPAYYQLQQNPFENVIAKVDAVLKLGPD
TRVKIQPYFWYGYGGATSQQTQSESAFLNKSAHTDTAARDLNGDGDTLDTIVVNGSSITRTRRPGITVTMEQSLGNHLLQ
AGVWYERAQHIQTGPESLTNADGSPQDPWMRSGLITRPDGSLYQYRDWETVSTATQLFAIGTFNFLDDRLGINAGLRTPQ
IKREFTNHANEGCGASSKTCAAAYDYTISKTYRETLPSFGMRYYLTPKQQVFFNITKNYRAVPNYAYSSSNGNVQVVNGQ
VVLNNDVVPETSVNTDLGYRWQGDIVTLSGSLFNVDFSNRQANSYDPVTLKSVNINAGGVHTWGGEIELGTVPVKGWSAY
ASFTSNHSAIQSNLNWKDASGSNTVLQTQGNDFPMTPRWMAALSLQYSPGAWYVRTDVKHTGKQFATLVNDEVVPEYTTV
DLDAGYRFGNIGMLKNPTIKLNVSNMFNTSYRIPTSSKVNAADTVRYNLGAPRSAAVTMQVDL

Specific function: Probable Receptor, Tonb-Dependent, That Participates In Iron Transport. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85212; Mature: 85212

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKAYLRPLALAVLTALASQAALAEETQLQTVTITGAGDKLGVGLLQQQEGARARSDVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHCCCCHHHHHHH
KAALEKQSPTSNIYQGINMLPGVNASSQDNTGMFGGALTIRGFNSDQIGVTINGVPVNDS
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCCCEEEEEEEEECCCC
GSYNVYPQEFVDLENLCQGSVTQGSSDTDAPHMGASGGNMSFVTCDPEKERRVRFAQTLG
CCCCCCHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC
SNSLQRTYVRGDTGLFADGKARAFASYSHSETDKWKGAGGMKRDHVDTGIRYDFSGGYIN
CCCCEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEE
ASVLYNRQIGNAFGTPTLQQLQQTGYGYDYSTSFVPGHLPPKNGTAQKETGPTPAYYQLQ
EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
QNPFENVIAKVDAVLKLGPDTRVKIQPYFWYGYGGATSQQTQSESAFLNKSAHTDTAARD
CCCHHHHHHHHHHHEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHC
LNGDGDTLDTIVVNGSSITRTRRPGITVTMEQSLGNHLLQAGVWYERAQHIQTGPESLTN
CCCCCCEEEEEEECCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
ADGSPQDPWMRSGLITRPDGSLYQYRDWETVSTATQLFAIGTFNFLDDRLGINAGLRTPQ
CCCCCCCCHHHCCCEECCCCCEEEECCCCHHHHHHHEEEEECHHHHHHHCCCCCCCCCCH
IKREFTNHANEGCGASSKTCAAAYDYTISKTYRETLPSFGMRYYLTPKQQVFFNITKNYR
HHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCE
AVPNYAYSSSNGNVQVVNGQVVLNNDVVPETSVNTDLGYRWQGDIVTLSGSLFNVDFSNR
ECCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCEEEEECCCC
QANSYDPVTLKSVNINAGGVHTWGGEIELGTVPVKGWSAYASFTSNHSAIQSNLNWKDAS
CCCCCCCEEEEEEECCCCCEEECCCEEEEEEEECCCCCHHHHHCCCCHHHHCCCCCCCCC
GSNTVLQTQGNDFPMTPRWMAALSLQYSPGAWYVRTDVKHTGKQFATLVNDEVVPEYTTV
CCCCEEEECCCCCCCCCHHHEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEE
DLDAGYRFGNIGMLKNPTIKLNVSNMFNTSYRIPTSSKVNAADTVRYNLGAPRSAAVTMQ
EECCCCEECCCCEECCCEEEEEEHHCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEE
VDL
EEC
>Mature Secondary Structure
MNKKAYLRPLALAVLTALASQAALAEETQLQTVTITGAGDKLGVGLLQQQEGARARSDVS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHCCCCHHHHHHH
KAALEKQSPTSNIYQGINMLPGVNASSQDNTGMFGGALTIRGFNSDQIGVTINGVPVNDS
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCCCEEEEEEEEECCCC
GSYNVYPQEFVDLENLCQGSVTQGSSDTDAPHMGASGGNMSFVTCDPEKERRVRFAQTLG
CCCCCCHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHC
SNSLQRTYVRGDTGLFADGKARAFASYSHSETDKWKGAGGMKRDHVDTGIRYDFSGGYIN
CCCCEEEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEE
ASVLYNRQIGNAFGTPTLQQLQQTGYGYDYSTSFVPGHLPPKNGTAQKETGPTPAYYQLQ
EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
QNPFENVIAKVDAVLKLGPDTRVKIQPYFWYGYGGATSQQTQSESAFLNKSAHTDTAARD
CCCHHHHHHHHHHHEEECCCCEEEEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCHHHHC
LNGDGDTLDTIVVNGSSITRTRRPGITVTMEQSLGNHLLQAGVWYERAQHIQTGPESLTN
CCCCCCEEEEEEECCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
ADGSPQDPWMRSGLITRPDGSLYQYRDWETVSTATQLFAIGTFNFLDDRLGINAGLRTPQ
CCCCCCCCHHHCCCEECCCCCEEEECCCCHHHHHHHEEEEECHHHHHHHCCCCCCCCCCH
IKREFTNHANEGCGASSKTCAAAYDYTISKTYRETLPSFGMRYYLTPKQQVFFNITKNYR
HHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCE
AVPNYAYSSSNGNVQVVNGQVVLNNDVVPETSVNTDLGYRWQGDIVTLSGSLFNVDFSNR
ECCCCEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEECCEEEEECCCC
QANSYDPVTLKSVNINAGGVHTWGGEIELGTVPVKGWSAYASFTSNHSAIQSNLNWKDAS
CCCCCCCEEEEEEECCCCCEEECCCEEEEEEEECCCCCHHHHHCCCCHHHHCCCCCCCCC
GSNTVLQTQGNDFPMTPRWMAALSLQYSPGAWYVRTDVKHTGKQFATLVNDEVVPEYTTV
CCCCEEEECCCCCCCCCHHHEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEE
DLDAGYRFGNIGMLKNPTIKLNVSNMFNTSYRIPTSSKVNAADTVRYNLGAPRSAAVTMQ
EECCCCEECCCCEECCCEEEEEEHHCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEEEE
VDL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA