| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498297
Identifier: 34498297
GI number: 34498297
Start: 3097776
End: 3098261
Strand: Reverse
Name: 34498297
Synonym: CV_2842
Alternate gene names: NA
Gene position: 3098261-3097776 (Counterclockwise)
Preceding gene: 34498298
Following gene: 34498295
Centisome position: 65.21
GC content: 66.05
Gene sequence:
>486_bases ATGGCGCGTGGCAACGCTTTCATGGAGAAGTCGATGCAAAAAACGATTCTGGCCGCGGATCCCTCGGCATCGGAACGGAT CGATGCAAGGATCGCCGAACTCGGGGGCTGGCGGGGAGAGGTGTTGAGCGGGATGCGCAGGCTGATTCGCGAAGCGGACC CGGAGATTGCCGAGGAGTGGAAATGGAAGGGCACGCCGGTCTGGTCGCGCGCGGGGATCATCTGCACCGGCGAATCCTAC CAGTCGGTGGTCAAGCTGACCTTTCTCAAAGGCGCGTCGCTGGATGACCCGGCCCGGCTCTTCAATGCCAGCCTGGATGG CAACGCGAGGCGCGCGATCGATATCCGCGAAGGGGACGAGATAGACCCGGACGCGTTCAAGGCGCTGGTGCTCGCCGCGG TCGCGCTCAATCTCTCAGCGGCCAAGCCCGGGCCGGGACGGCGCAAGCGCGATCCGGGCCGAGGCGCGCCGGAGGGCCGC CTCTAA
Upstream 100 bases:
>100_bases GGAATGTTGATGGCATGATTGACGATCCCGGCCCGGAGTCCAGGGCAATCATCCACGCCTGGGCGCCATGCTTTGCCGGC TGGATGCGGAGCGGGAAATC
Downstream 100 bases:
>100_bases GGCGGGTTGGCCAAGCTCCTGACGCCGACGCAGGCAGTGCAAGTCGTACGGCAAGTCGGCGCAACGCAGCATCAGGGGTT TTGTTAGCCGCTCTAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MARGNAFMEKSMQKTILAADPSASERIDARIAELGGWRGEVLSGMRRLIREADPEIAEEWKWKGTPVWSRAGIICTGESY QSVVKLTFLKGASLDDPARLFNASLDGNARRAIDIREGDEIDPDAFKALVLAAVALNLSAAKPGPGRRKRDPGRGAPEGR L
Sequences:
>Translated_161_residues MARGNAFMEKSMQKTILAADPSASERIDARIAELGGWRGEVLSGMRRLIREADPEIAEEWKWKGTPVWSRAGIICTGESY QSVVKLTFLKGASLDDPARLFNASLDGNARRAIDIREGDEIDPDAFKALVLAAVALNLSAAKPGPGRRKRDPGRGAPEGR L >Mature_160_residues ARGNAFMEKSMQKTILAADPSASERIDARIAELGGWRGEVLSGMRRLIREADPEIAEEWKWKGTPVWSRAGIICTGESYQ SVVKLTFLKGASLDDPARLFNASLDGNARRAIDIREGDEIDPDAFKALVLAAVALNLSAAKPGPGRRKRDPGRGAPEGRL
Specific function: Unknown
COG id: COG5649
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17487; Mature: 17356
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGNAFMEKSMQKTILAADPSASERIDARIAELGGWRGEVLSGMRRLIREADPEIAEEW CCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHC KWKGTPVWSRAGIICTGESYQSVVKLTFLKGASLDDPARLFNASLDGNARRAIDIREGDE CCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEECCCCCC IDPDAFKALVLAAVALNLSAAKPGPGRRKRDPGRGAPEGRL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARGNAFMEKSMQKTILAADPSASERIDARIAELGGWRGEVLSGMRRLIREADPEIAEEW CCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHC KWKGTPVWSRAGIICTGESYQSVVKLTFLKGASLDDPARLFNASLDGNARRAIDIREGDE CCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEEECCCCCC IDPDAFKALVLAAVALNLSAAKPGPGRRKRDPGRGAPEGRL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA