| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498298
Identifier: 34498298
GI number: 34498298
Start: 3098391
End: 3099422
Strand: Reverse
Name: 34498298
Synonym: CV_2843
Alternate gene names: NA
Gene position: 3099422-3098391 (Counterclockwise)
Preceding gene: 34498305
Following gene: 34498297
Centisome position: 65.24
GC content: 66.09
Gene sequence:
>1032_bases ATGTTCAGGCGTGTGGAAGGCGAGCTGTCGCTGAGCCTGGCGCTTCAGGGCGGCGGCGCGCATGGCGCGTTCACCTGGGG CGTGCTGGATGCCTTGCTGGAAGCGGGGCGCTACCGCTTCGACGGCCTGAGCGGCACCAGCGCGGGGGCGATGAACGCGG TGGCGGTGGCGCACGGCTTGTGCCTGGGCGGTCCTGAGGCGGCGAGGGAGACGCTGGCCGCGTTCTGGCTCCGTGTGGGG GAGAGCTTGCCCGGGGAAATGGCGCGGCCCTCGCCATTCAGCATGGACTCAACCGTCTCGCCCAGCCTGAAGATGGCGCT GAAACTATCCCAATGGTTTTCGCCGTACCAGCTCAATCCGCTGGATTACAACCCCTTGCGCGACATCATCGTCTCGCTGT TCGATTTCGAGCGCATCCGGCAGGCCTCGCCGGTGCAGCTGTTCGTGGCCGCCACGCATGCCAACAGCGGGCAACTGAAG CTGTTCCGCAACGACGATCTGTGCGCCGACGCTCTGCTGGCATCCGCTTGCCTGCCTTCGTTGCAACAGGCCGTGATGAT AGACGGCGAGCCTTACTGGGACGGCGGCTTCGCCGCCAACCCGGCGATCTTTCCCTTGTTCAAGTTCTGCCGCAGCGATG ACATCCTGCTGGTGTTGCTGTCGCCGATGGCGCACGGCGAGACTCCGCGCACGGCCGAGGAAATCCAGCGCCGGGCGATG CTGCTGGGTTTCAACAGCGCTTTTCTGCGCGAGATGCGCTTGTTTGCGCTGCTGCGGGAGATGGCCGACGCGCCGGCTTA CCTGCGCGGCCGGCTGGAGCGCCACTTGCTGGCCACGCGCTTCCATTTGATAGAGGCCCATGACTTGCTGTCCGAGCTCG ACGCGTCCAGCCGGGCGTTGACCCATGGCCCGTTCCTCGCATGGCTGCGAGACGAAGGGCGTAAGGCGGCGCAGTCGTGG ATGGCGGAGCACGGCGGCAAGGTGGGCCGCAGCGCCAGCGTGGACATCAACCGGCTGTTTCTCAAAGCCTGA
Upstream 100 bases:
>100_bases CGGCGGAATTGCCCGTTTCTCAGCTTGTCCATATAAACGTCACTTGAGAGCGGCGAGCTGCCATGCCATATTGTGCATTG CAGCAATTCTGGGAGCGGCT
Downstream 100 bases:
>100_bases CGGCCTGCCGCTCCGGGCGTGGCAAGGCTGGAATGTTGATGGCATGATTGACGATCCCGGCCCGGAGTCCAGGGCAATCA TCCACGCCTGGGCGCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin Family Phospholipase; Patatin-Like Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Esterase; Serine Protease; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; FabD/Lysophospholipase; Transmembrane Protein; Dehydrogenase/Reductase; Alpha/Beta Fold Family Hydrolase; Phospholipase
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MFRRVEGELSLSLALQGGGAHGAFTWGVLDALLEAGRYRFDGLSGTSAGAMNAVAVAHGLCLGGPEAARETLAAFWLRVG ESLPGEMARPSPFSMDSTVSPSLKMALKLSQWFSPYQLNPLDYNPLRDIIVSLFDFERIRQASPVQLFVAATHANSGQLK LFRNDDLCADALLASACLPSLQQAVMIDGEPYWDGGFAANPAIFPLFKFCRSDDILLVLLSPMAHGETPRTAEEIQRRAM LLGFNSAFLREMRLFALLREMADAPAYLRGRLERHLLATRFHLIEAHDLLSELDASSRALTHGPFLAWLRDEGRKAAQSW MAEHGGKVGRSASVDINRLFLKA
Sequences:
>Translated_343_residues MFRRVEGELSLSLALQGGGAHGAFTWGVLDALLEAGRYRFDGLSGTSAGAMNAVAVAHGLCLGGPEAARETLAAFWLRVG ESLPGEMARPSPFSMDSTVSPSLKMALKLSQWFSPYQLNPLDYNPLRDIIVSLFDFERIRQASPVQLFVAATHANSGQLK LFRNDDLCADALLASACLPSLQQAVMIDGEPYWDGGFAANPAIFPLFKFCRSDDILLVLLSPMAHGETPRTAEEIQRRAM LLGFNSAFLREMRLFALLREMADAPAYLRGRLERHLLATRFHLIEAHDLLSELDASSRALTHGPFLAWLRDEGRKAAQSW MAEHGGKVGRSASVDINRLFLKA >Mature_343_residues MFRRVEGELSLSLALQGGGAHGAFTWGVLDALLEAGRYRFDGLSGTSAGAMNAVAVAHGLCLGGPEAARETLAAFWLRVG ESLPGEMARPSPFSMDSTVSPSLKMALKLSQWFSPYQLNPLDYNPLRDIIVSLFDFERIRQASPVQLFVAATHANSGQLK LFRNDDLCADALLASACLPSLQQAVMIDGEPYWDGGFAANPAIFPLFKFCRSDDILLVLLSPMAHGETPRTAEEIQRRAM LLGFNSAFLREMRLFALLREMADAPAYLRGRLERHLLATRFHLIEAHDLLSELDASSRALTHGPFLAWLRDEGRKAAQSW MAEHGGKVGRSASVDINRLFLKA
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37645; Mature: 37645
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRVEGELSLSLALQGGGAHGAFTWGVLDALLEAGRYRFDGLSGTSAGAMNAVAVAHGL CCCEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHH CLGGPEAARETLAAFWLRVGESLPGEMARPSPFSMDSTVSPSLKMALKLSQWFSPYQLNP HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC LDYNPLRDIIVSLFDFERIRQASPVQLFVAATHANSGQLKLFRNDDLCADALLASACLPS CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHH LQQAVMIDGEPYWDGGFAANPAIFPLFKFCRSDDILLVLLSPMAHGETPRTAEEIQRRAM HHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHH LLGFNSAFLREMRLFALLREMADAPAYLRGRLERHLLATRFHLIEAHDLLSELDASSRAL HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE THGPFLAWLRDEGRKAAQSWMAEHGGKVGRSASVDINRLFLKA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC >Mature Secondary Structure MFRRVEGELSLSLALQGGGAHGAFTWGVLDALLEAGRYRFDGLSGTSAGAMNAVAVAHGL CCCEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHH CLGGPEAARETLAAFWLRVGESLPGEMARPSPFSMDSTVSPSLKMALKLSQWFSPYQLNP HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC LDYNPLRDIIVSLFDFERIRQASPVQLFVAATHANSGQLKLFRNDDLCADALLASACLPS CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHH LQQAVMIDGEPYWDGGFAANPAIFPLFKFCRSDDILLVLLSPMAHGETPRTAEEIQRRAM HHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHH LLGFNSAFLREMRLFALLREMADAPAYLRGRLERHLLATRFHLIEAHDLLSELDASSRAL HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE THGPFLAWLRDEGRKAAQSWMAEHGGKVGRSASVDINRLFLKA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA