| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 34498277
GI number: 34498277
Start: 3072649
End: 3073797
Strand: Reverse
Name: livK [C]
Synonym: CV_2822
Alternate gene names: 34498277
Gene position: 3073797-3072649 (Counterclockwise)
Preceding gene: 34498278
Following gene: 34498276
Centisome position: 64.7
GC content: 66.41
Gene sequence:
>1149_bases ATGGCTTGGAACAAACTGTTTGCGGAAATGAACTGGGTGGTGGCGCTGGGCGGCATGATGGCGCCGTTCGCCATGGCGGC GGCCCATGCCGATACCGTGGTCAAGATAGGCTTCGCCTCGCCGCTGTCCGGCCCGCAGGCCCACTATGGCAAGGACAATG AAAACGCCGCCAAAATGGCGGTGGACGATGTCAACGCCAAGGGCCTGGTGGTGGGCGGGCAGAAGATCAAGTTCGAACTG GTGTCCGAGGACGACCAGGCCGACCCGCGCATCGGCACCCAGGCGGCGCAGCGGCTGGTGGACGCCGGCGTGAAAGCCGT CATCGGCCACTTCAACTCCGGCGTGTCCATCCCGGCCTCGCGCCTGTATTCCGACGTCGGCATTCCGCAGCTGTCGGTGG CCACCAACCCGGCCTATACCCAGCAAGGCTACAAAACCGCCTTCCGCCTGGTGGGCAGCGACAGCCAGATAGGCGGCGCG CTGGGGCAGTTCGCCGTCAAAATGATGAAGGCCAAGAGCATCGTCGCCATCGACGACCGCACCGCCTACGGCCAGGGCAT TGCCGACGAGTTCGTCAAGGCGGTGGCCGCCAACGGCGGCAAGGTGACGCGCCGCGAATTCACCACCGACAAGGCCACCG ACTTCACCGCCATTCTCACCTCGCTCAAGGCCGTCAATCCGGACGTGGTGTTCTACGGCGGCGCCGACGCCCAGGCCGCG CCCATGGTCAAGCAGATGAAGCGGTTGGGGCTCAAGGCCAAGCTGATGGGCGGCGACATGCTCAACACCCCCACCTTCAT CCAACTGGCCGGCGCGGACGCGGCCGGCCACTACTCGGCGGTGGCCGGCGGCGTGCTGAGCGCCCGCCCGGCGGGCAAAG AGTTCGAGCGCCGCTACAAGGCACGTTTCCATCAGGACGTGGTGCTGCTGGGGCCGCAATTCTACGACGGCGTGATGCTG GTGGCCGCGGCCATGAAGCAGGCGGGCTCGGTGGAGCCGGCCAAATACCTGCCCAAGCTGGCCGCCATCCGCTACAGCGG CGTGACGGCGGACTTCGCCTTCGCGCCCAACGGCAATCTGTTGAAAGCGCCGGTGACGCTGTCCACGGTGAAGAACAACG CCTGGGCCGTGGAGACGGTGGTCCGCTGA
Upstream 100 bases:
>100_bases ACCCGCGGCAGGCCGGCGCAGACCGGCCGCTGCGGGGGAGCGGTAGCAGGGCGGGCCGGGTGGCTTGCCCTGGTCAATGC AGCAATAAAGGAGACATCTC
Downstream 100 bases:
>100_bases GCGCGGCCAGGCAAAACGACATTTCCCCCGGCGTACTCCTCCGCCTTCGGGCCGGCTTTCTTCGTGCAGAGGCCGGCTTC TTTTTTTATCGTTTGTCGGC
Product: amino acid ABC transporter
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAWNKLFAEMNWVVALGGMMAPFAMAAAHADTVVKIGFASPLSGPQAHYGKDNENAAKMAVDDVNAKGLVVGGQKIKFEL VSEDDQADPRIGTQAAQRLVDAGVKAVIGHFNSGVSIPASRLYSDVGIPQLSVATNPAYTQQGYKTAFRLVGSDSQIGGA LGQFAVKMMKAKSIVAIDDRTAYGQGIADEFVKAVAANGGKVTRREFTTDKATDFTAILTSLKAVNPDVVFYGGADAQAA PMVKQMKRLGLKAKLMGGDMLNTPTFIQLAGADAAGHYSAVAGGVLSARPAGKEFERRYKARFHQDVVLLGPQFYDGVML VAAAMKQAGSVEPAKYLPKLAAIRYSGVTADFAFAPNGNLLKAPVTLSTVKNNAWAVETVVR
Sequences:
>Translated_382_residues MAWNKLFAEMNWVVALGGMMAPFAMAAAHADTVVKIGFASPLSGPQAHYGKDNENAAKMAVDDVNAKGLVVGGQKIKFEL VSEDDQADPRIGTQAAQRLVDAGVKAVIGHFNSGVSIPASRLYSDVGIPQLSVATNPAYTQQGYKTAFRLVGSDSQIGGA LGQFAVKMMKAKSIVAIDDRTAYGQGIADEFVKAVAANGGKVTRREFTTDKATDFTAILTSLKAVNPDVVFYGGADAQAA PMVKQMKRLGLKAKLMGGDMLNTPTFIQLAGADAAGHYSAVAGGVLSARPAGKEFERRYKARFHQDVVLLGPQFYDGVML VAAAMKQAGSVEPAKYLPKLAAIRYSGVTADFAFAPNGNLLKAPVTLSTVKNNAWAVETVVR >Mature_381_residues AWNKLFAEMNWVVALGGMMAPFAMAAAHADTVVKIGFASPLSGPQAHYGKDNENAAKMAVDDVNAKGLVVGGQKIKFELV SEDDQADPRIGTQAAQRLVDAGVKAVIGHFNSGVSIPASRLYSDVGIPQLSVATNPAYTQQGYKTAFRLVGSDSQIGGAL GQFAVKMMKAKSIVAIDDRTAYGQGIADEFVKAVAANGGKVTRREFTTDKATDFTAILTSLKAVNPDVVFYGGADAQAAP MVKQMKRLGLKAKLMGGDMLNTPTFIQLAGADAAGHYSAVAGGVLSARPAGKEFERRYKARFHQDVVLLGPQFYDGVMLV AAAMKQAGSVEPAKYLPKLAAIRYSGVTADFAFAPNGNLLKAPVTLSTVKNNAWAVETVVR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=349, Percent_Identity=31.2320916905444, Blast_Score=144, Evalue=9e-36, Organism=Escherichia coli, GI48994941, Length=244, Percent_Identity=31.9672131147541, Blast_Score=131, Evalue=6e-32,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40266; Mature: 40134
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNKLFAEMNWVVALGGMMAPFAMAAAHADTVVKIGFASPLSGPQAHYGKDNENAAKMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEE VDDVNAKGLVVGGQKIKFELVSEDDQADPRIGTQAAQRLVDAGVKAVIGHFNSGVSIPAS EECCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLYSDVGIPQLSVATNPAYTQQGYKTAFRLVGSDSQIGGALGQFAVKMMKAKSIVAIDDR HHHHHCCCCEEEECCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCEEEECCC TAYGQGIADEFVKAVAANGGKVTRREFTTDKATDFTAILTSLKAVNPDVVFYGGADAQAA CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHH PMVKQMKRLGLKAKLMGGDMLNTPTFIQLAGADAAGHYSAVAGGVLSARPAGKEFERRYK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH ARFHQDVVLLGPQFYDGVMLVAAAMKQAGSVEPAKYLPKLAAIRYSGVTADFAFAPNGNL HHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEEEECCCCCE LKAPVTLSTVKNNAWAVETVVR EECCEEEEEECCCCEEEEEECC >Mature Secondary Structure AWNKLFAEMNWVVALGGMMAPFAMAAAHADTVVKIGFASPLSGPQAHYGKDNENAAKMA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHEE VDDVNAKGLVVGGQKIKFELVSEDDQADPRIGTQAAQRLVDAGVKAVIGHFNSGVSIPAS EECCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLYSDVGIPQLSVATNPAYTQQGYKTAFRLVGSDSQIGGALGQFAVKMMKAKSIVAIDDR HHHHHCCCCEEEECCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCEEEECCC TAYGQGIADEFVKAVAANGGKVTRREFTTDKATDFTAILTSLKAVNPDVVFYGGADAQAA CCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHH PMVKQMKRLGLKAKLMGGDMLNTPTFIQLAGADAAGHYSAVAGGVLSARPAGKEFERRYK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHH ARFHQDVVLLGPQFYDGVMLVAAAMKQAGSVEPAKYLPKLAAIRYSGVTADFAFAPNGNL HHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEECCCEEEEEECCCCCE LKAPVTLSTVKNNAWAVETVVR EECCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA