Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498181
Identifier: 34498181
GI number: 34498181
Start: 2956218
End: 2956661
Strand: Reverse
Name: 34498181
Synonym: CV_2726
Alternate gene names: NA
Gene position: 2956661-2956218 (Counterclockwise)
Preceding gene: 34498182
Following gene: 34498180
Centisome position: 62.23
GC content: 66.44
Gene sequence:
>444_bases ATGAGTTTGAACAAGGAAGATTTTGAACGGCTGGCGGATTTCCGCTACCGGCTGCGCCGCTTTTTGCGGTTCAGCGAGGA CCTGGCGCAGGATAACGGCATCACCCCGCTGCAGTACCTGCTGCTGCTGCAATTGAAAGGCTATCCGGGCCGCAGCTGGG CGACGGTGGCGGAACTGGCGGAGCGGCTGCAGTCCCATCATCACAGCGTGGTGGGGCTGGTCAGCCGCTGCGAGGGGCAA ATGCTGGTGCGGCGCCAGCCGGGGCGCGAGGACAGGCGCTGCGTGGAAGTGCATCTGCAGCCCAAGGGCGAGGAGCTGGT GGCGCGGCTGGCCGGCGCGCACCGCGACGAGCTGATCGCGCTGCAGCAGGCCGGCGGCCATCTGTCGCTGGACCTGCTGC TGCAGACCAAGCTGCAATTACAGCTGCCGGAGGAGCTGGGCTAG
Upstream 100 bases:
>100_bases GTCATGCCGAAGGCGCGGAGGCGTGAACGGCATGGCCGTCGGCGATTGGCCGGCGATGCGTTAGACTGCGGCGCAGGATA CACCGCATAGAAGCGATGGC
Downstream 100 bases:
>100_bases GCTTGGTGACGCTCGTCCAGGCGCCGCGGCTGGGTCGCCTGGGCAAATAGCGCGGCGCGTTGTTGCATATGGCTTGACGG CATTTAGTAAACGCGGCGTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSLNKEDFERLADFRYRLRRFLRFSEDLAQDNGITPLQYLLLLQLKGYPGRSWATVAELAERLQSHHHSVVGLVSRCEGQ MLVRRQPGREDRRCVEVHLQPKGEELVARLAGAHRDELIALQQAGGHLSLDLLLQTKLQLQLPEELG
Sequences:
>Translated_147_residues MSLNKEDFERLADFRYRLRRFLRFSEDLAQDNGITPLQYLLLLQLKGYPGRSWATVAELAERLQSHHHSVVGLVSRCEGQ MLVRRQPGREDRRCVEVHLQPKGEELVARLAGAHRDELIALQQAGGHLSLDLLLQTKLQLQLPEELG >Mature_146_residues SLNKEDFERLADFRYRLRRFLRFSEDLAQDNGITPLQYLLLLQLKGYPGRSWATVAELAERLQSHHHSVVGLVSRCEGQM LVRRQPGREDRRCVEVHLQPKGEELVARLAGAHRDELIALQQAGGHLSLDLLLQTKLQLQLPEELG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16874; Mature: 16742
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNKEDFERLADFRYRLRRFLRFSEDLAQDNGITPLQYLLLLQLKGYPGRSWATVAELA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH ERLQSHHHSVVGLVSRCEGQMLVRRQPGREDRRCVEVHLQPKGEELVARLAGAHRDELIA HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHH LQQAGGHLSLDLLLQTKLQLQLPEELG HHHCCCCEEHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLNKEDFERLADFRYRLRRFLRFSEDLAQDNGITPLQYLLLLQLKGYPGRSWATVAELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH ERLQSHHHSVVGLVSRCEGQMLVRRQPGREDRRCVEVHLQPKGEELVARLAGAHRDELIA HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHH LQQAGGHLSLDLLLQTKLQLQLPEELG HHHCCCCEEHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA