Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is yeaO [C]
Identifier: 34498182
GI number: 34498182
Start: 2956736
End: 2957119
Strand: Reverse
Name: yeaO [C]
Synonym: CV_2727
Alternate gene names: 34498182
Gene position: 2957119-2956736 (Counterclockwise)
Preceding gene: 34498183
Following gene: 34498181
Centisome position: 62.24
GC content: 66.15
Gene sequence:
>384_bases ATGGCAATCGAAATACGCTTGGAACGGGTAGAGGGGTGCAGAAAGCCGCCGGCAGGCGCTTTCCTGGTAGACGGCAAGTG GCCGCGCGGTTTGCCGCGCTCGGCGCTTGCGGCTGGGCATTGGCTGCCTAGGGTGATGCCGACCGAGGAACTGGTGGCGT GGATGCGCCTGCAGCCCTTGCGCTGGTCGACCTTCTGCGATATCTACTGGGCGGATATGAGCAATAATCCGGCGCGTTGG AAGCCCTTGCTGGACGCGATGGAGCTGGGCGGGCTGGTGCTGCTGCATAGCGGAGAGGCGGACGAACGCAGCCCGGTGCG CGCCCTGGCCGACTTTCTGCTGGCGCGCTACCGCGAGCGTCATGCCGAAGGCGCGGAGGCGTGA
Upstream 100 bases:
>100_bases CATATATCGCACTGCGATATTTTAATTAAAAGCTAAATTAGGCGATAGGCGCCGGAGGGGCTGATTTGCGCGTGCGAACA CAGGACAGGAGTGAATGATC
Downstream 100 bases:
>100_bases ACGGCATGGCCGTCGGCGATTGGCCGGCGATGCGTTAGACTGCGGCGCAGGATACACCGCATAGAAGCGATGGCATGAGT TTGAACAAGGAAGATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAIEIRLERVEGCRKPPAGAFLVDGKWPRGLPRSALAAGHWLPRVMPTEELVAWMRLQPLRWSTFCDIYWADMSNNPARW KPLLDAMELGGLVLLHSGEADERSPVRALADFLLARYRERHAEGAEA
Sequences:
>Translated_127_residues MAIEIRLERVEGCRKPPAGAFLVDGKWPRGLPRSALAAGHWLPRVMPTEELVAWMRLQPLRWSTFCDIYWADMSNNPARW KPLLDAMELGGLVLLHSGEADERSPVRALADFLLARYRERHAEGAEA >Mature_126_residues AIEIRLERVEGCRKPPAGAFLVDGKWPRGLPRSALAAGHWLPRVMPTEELVAWMRLQPLRWSTFCDIYWADMSNNPARWK PLLDAMELGGLVLLHSGEADERSPVRALADFLLARYRERHAEGAEA
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14404; Mature: 14273
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEIRLERVEGCRKPPAGAFLVDGKWPRGLPRSALAAGHWLPRVMPTEELVAWMRLQPL CEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCC RWSTFCDIYWADMSNNPARWKPLLDAMELGGLVLLHSGEADERSPVRALADFLLARYRER CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH HAEGAEA HCCCCCC >Mature Secondary Structure AIEIRLERVEGCRKPPAGAFLVDGKWPRGLPRSALAAGHWLPRVMPTEELVAWMRLQPL EEEEEEHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCC RWSTFCDIYWADMSNNPARWKPLLDAMELGGLVLLHSGEADERSPVRALADFLLARYRER CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH HAEGAEA HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA