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The map label for this gene is uidR [C]

Identifier: 34498179

GI number: 34498179

Start: 2954030

End: 2954671

Strand: Reverse

Name: uidR [C]

Synonym: CV_2724

Alternate gene names: 34498179

Gene position: 2954671-2954030 (Counterclockwise)

Preceding gene: 34498180

Following gene: 34498178

Centisome position: 62.19

GC content: 63.08

Gene sequence:

>642_bases
ATGGAGGGCAACCGTCCCGATACCGCAACCCGCATCCTGGACGTCGCTGAGCGTCTGTTCGTGGAGCACGGCTTCGAGGC
GACGTCTCTGCGCATGATCACCCAGCAGGCCGAGGTGAATCTGGCCGCGGTGAACTATCACTTCGGCTCCAAGGATGCGT
TGTTCGAATCCGTGTTTCTGCGCAGGCTGGCGCCCTTGCTGGAAGATTGCCTGGCGGAACTGGATACGCTGGAGGCGCGG
GAAGGCGTCCTGCCGCTGGAGCAGCTGGTGCTGTCGTTCATACGGCCCTGTCTGGCTCTGTCCAAGGACCCGTCGCGCGG
CGGCGCCATGTTCGTGCGCCTGCTGTCGCGGACCCTGGTGGAAAACCACCGCCTGCTGCGCGAGACCATCTCGCAGCAGT
ACAGCGTGTTCGTGCAGCGCTATACCAGCGCCTTCCAACGGGCGCTGCCGCACCTGGAGTCGGAGCAGCTCGCCTGGCGC
ATGCACCTCGCCTTCAGCGTCATGTTCAACGCCTTCGCCGGCAACGATGTGCTGAAAATCTTCACGCGCAGCCAGATCGT
TACCGCCAGGGATCCGGACATGATCGTCAAATATCTGGTGCCTTTCGTGATTGCCGGTCTGGTCGCGCCCGTCGAAAGCT
GA

Upstream 100 bases:

>100_bases
CCTTGACATCGATCAAGTTAAAACGTAAGTTTGAAACGCTTGTTCGAAAGCTGAGATGAGCAAGACCAAATCACAAAACA
CAACAAAGGCTCTGGAGATC

Downstream 100 bases:

>100_bases
TTCCGCATCGCCCGCCAATTACAACAGCAAGGCGGCGCATGCGGAACTGAGGGGTCAACACGAGGGTAAACACAATGATT
GCTGCCGTTCTTCTGGTCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; Transcliptional Regulator TetR Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MEGNRPDTATRILDVAERLFVEHGFEATSLRMITQQAEVNLAAVNYHFGSKDALFESVFLRRLAPLLEDCLAELDTLEAR
EGVLPLEQLVLSFIRPCLALSKDPSRGGAMFVRLLSRTLVENHRLLRETISQQYSVFVQRYTSAFQRALPHLESEQLAWR
MHLAFSVMFNAFAGNDVLKIFTRSQIVTARDPDMIVKYLVPFVIAGLVAPVES

Sequences:

>Translated_213_residues
MEGNRPDTATRILDVAERLFVEHGFEATSLRMITQQAEVNLAAVNYHFGSKDALFESVFLRRLAPLLEDCLAELDTLEAR
EGVLPLEQLVLSFIRPCLALSKDPSRGGAMFVRLLSRTLVENHRLLRETISQQYSVFVQRYTSAFQRALPHLESEQLAWR
MHLAFSVMFNAFAGNDVLKIFTRSQIVTARDPDMIVKYLVPFVIAGLVAPVES
>Mature_213_residues
MEGNRPDTATRILDVAERLFVEHGFEATSLRMITQQAEVNLAAVNYHFGSKDALFESVFLRRLAPLLEDCLAELDTLEAR
EGVLPLEQLVLSFIRPCLALSKDPSRGGAMFVRLLSRTLVENHRLLRETISQQYSVFVQRYTSAFQRALPHLESEQLAWR
MHLAFSVMFNAFAGNDVLKIFTRSQIVTARDPDMIVKYLVPFVIAGLVAPVES

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24097; Mature: 24097

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGNRPDTATRILDVAERLFVEHGFEATSLRMITQQAEVNLAAVNYHFGSKDALFESVFL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
RRLAPLLEDCLAELDTLEAREGVLPLEQLVLSFIRPCLALSKDPSRGGAMFVRLLSRTLV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ENHRLLRETISQQYSVFVQRYTSAFQRALPHLESEQLAWRMHLAFSVMFNAFAGNDVLKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
FTRSQIVTARDPDMIVKYLVPFVIAGLVAPVES
HHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEGNRPDTATRILDVAERLFVEHGFEATSLRMITQQAEVNLAAVNYHFGSKDALFESVFL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHH
RRLAPLLEDCLAELDTLEAREGVLPLEQLVLSFIRPCLALSKDPSRGGAMFVRLLSRTLV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ENHRLLRETISQQYSVFVQRYTSAFQRALPHLESEQLAWRMHLAFSVMFNAFAGNDVLKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
FTRSQIVTARDPDMIVKYLVPFVIAGLVAPVES
HHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA