Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498136
Identifier: 34498136
GI number: 34498136
Start: 2903883
End: 2904332
Strand: Reverse
Name: 34498136
Synonym: CV_2681
Alternate gene names: NA
Gene position: 2904332-2903883 (Counterclockwise)
Preceding gene: 34498138
Following gene: 34498135
Centisome position: 61.13
GC content: 60.67
Gene sequence:
>450_bases ATGCAAGCGACAAACAAAAAACTGGGCGAGCGGGTATTGCACGCGGTGCTGTACGAAGCGTGCGCAATGGCCCTGCTGGT GCCGCTGGCGGCGCTGGCATTGCAAAAGAACATGCTGCACATGGGCGCATTGGCCTTGATGATGTCGACGGCTGCCATGC TGTGGAACATGGTGTTCAATGCCTTGTTCGAACGCATCGAGCGCTATTTTTGCTGGCAGCGCACCGTTGCGGTCCGTTGC CTGCACGCGCTGGGCTTCGAGGGCGGTCTGGTGGTGCTGCTGGTGCCGCTGGCCGCCTGGTGGCTGGACAGCAGTTACTG GCAGGCCTTCTTGCTGGATCTGGGGTTCTTCGCCTTTTTCCTGCCTTATACCTATGTGTTCAACTGGCTGTACGACCACC TGCGCGAGCGTCTGATCGCCCGCCGGAGTCTGGCGGCCGCAGTGGAGTGA
Upstream 100 bases:
>100_bases GAGGTAGTCATATCGGTTTAACCGATGGTTGGTATTTTTATAGTATCCGAAAATCCAATCATAATGCCAGGCATTGAACT TCAGCAGTCGGGAGAGATCG
Downstream 100 bases:
>100_bases TGGATGAAAGTCTGGCTGTTCCTGATGGGGGCCATCCTGTCCGAAGTGGTGGCCACCTCCGCGCTGAAGGCCTCCGACGG TTTTACCCGGCTGTGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQATNKKLGERVLHAVLYEACAMALLVPLAALALQKNMLHMGALALMMSTAAMLWNMVFNALFERIERYFCWQRTVAVRC LHALGFEGGLVVLLVPLAAWWLDSSYWQAFLLDLGFFAFFLPYTYVFNWLYDHLRERLIARRSLAAAVE
Sequences:
>Translated_149_residues MQATNKKLGERVLHAVLYEACAMALLVPLAALALQKNMLHMGALALMMSTAAMLWNMVFNALFERIERYFCWQRTVAVRC LHALGFEGGLVVLLVPLAAWWLDSSYWQAFLLDLGFFAFFLPYTYVFNWLYDHLRERLIARRSLAAAVE >Mature_149_residues MQATNKKLGERVLHAVLYEACAMALLVPLAALALQKNMLHMGALALMMSTAAMLWNMVFNALFERIERYFCWQRTVAVRC LHALGFEGGLVVLLVPLAAWWLDSSYWQAFLLDLGFFAFFLPYTYVFNWLYDHLRERLIARRSLAAAVE
Specific function: Unknown
COG id: COG4125
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17123; Mature: 17123
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATNKKLGERVLHAVLYEACAMALLVPLAALALQKNMLHMGALALMMSTAAMLWNMVFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFERIERYFCWQRTVAVRCLHALGFEGGLVVLLVPLAAWWLDSSYWQAFLLDLGFFAFF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPYTYVFNWLYDHLRERLIARRSLAAAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQATNKKLGERVLHAVLYEACAMALLVPLAALALQKNMLHMGALALMMSTAAMLWNMVFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALFERIERYFCWQRTVAVRCLHALGFEGGLVVLLVPLAAWWLDSSYWQAFLLDLGFFAFF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPYTYVFNWLYDHLRERLIARRSLAAAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA