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The map label for this gene is yggA [C]

Identifier: 34498022

GI number: 34498022

Start: 2768199

End: 2768834

Strand: Reverse

Name: yggA [C]

Synonym: CV_2567

Alternate gene names: 34498022

Gene position: 2768834-2768199 (Counterclockwise)

Preceding gene: 34498023

Following gene: 34498020

Centisome position: 58.28

GC content: 64.15

Gene sequence:

>636_bases
ATGTTCAATTTCAGTGTTTTCCTTTCCGCGCTGGGCATCTCCTTCAGCCAGATCGTCGGCATCGGCCCGCAGAACGCTTA
TGTGCTGCGGCAGGGCATAGGACGCAGCCACGTGCTGCCCATCGTCGCCATCTGCATCGTCGCCGACGTGTTGCTGATCG
CCGCCGGCGTGTTGGGGGTGGGCAAAGTTGTGGCCGGCATTCCCGGCTTCATCAGCGTGGTCACCTGGGCCGGCGCGGCT
TTCATCCTGTGGCTGGGGTTCAAGTCCTTCCGCTCGGCGCTGAACGCCGGTGGCATGACGCTGGAGGGCGGCGTGGAGCG
CGACCGCAAGAGCGCCATCCGCACCATCCTGGTGGTGACCCTGCTCAATCCCTACGTTTGGCTGGACACCGTGGTGCTGA
TCGGCAGCGTGTCCTCGGTGTACGGCGAACACGGTTCGCTGTCTTTCCTGATGGGCAGTCTGAGCGCTTCCGTGCTGTGG
TTCGGCGCCATCGGCCTGTTCGCCGGCAAGCTGGCGCCGCTGTTCACCAAGCCTGCGAGCTGGCGGGTGCTGGACTGCGT
GATCGGCTTCGTGATGCTGTTCACCGCCTCCATGCTGGTCTACAACTACGGGCTATCCGCGCCGCTGCCGCTGTAA

Upstream 100 bases:

>100_bases
AGGGCGCGATTATAAATTCTGCTTATGTATCATGATTTTTATTAGTTTTACTTAAGCATTTCCGCCGGTTAATCTGCCTG
CAAATAGTTTGGAGCAGGCA

Downstream 100 bases:

>100_bases
TCTTCCAACGCCGTTTTCAAGGCCTGCAAGGCCGGCAGTTCCAGCGCCTGGGGCGCATGGCACAAGCCGACGCGGCGGTA
GGGCGTCGCACCGGACAGCG

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFNFSVFLSALGISFSQIVGIGPQNAYVLRQGIGRSHVLPIVAICIVADVLLIAAGVLGVGKVVAGIPGFISVVTWAGAA
FILWLGFKSFRSALNAGGMTLEGGVERDRKSAIRTILVVTLLNPYVWLDTVVLIGSVSSVYGEHGSLSFLMGSLSASVLW
FGAIGLFAGKLAPLFTKPASWRVLDCVIGFVMLFTASMLVYNYGLSAPLPL

Sequences:

>Translated_211_residues
MFNFSVFLSALGISFSQIVGIGPQNAYVLRQGIGRSHVLPIVAICIVADVLLIAAGVLGVGKVVAGIPGFISVVTWAGAA
FILWLGFKSFRSALNAGGMTLEGGVERDRKSAIRTILVVTLLNPYVWLDTVVLIGSVSSVYGEHGSLSFLMGSLSASVLW
FGAIGLFAGKLAPLFTKPASWRVLDCVIGFVMLFTASMLVYNYGLSAPLPL
>Mature_211_residues
MFNFSVFLSALGISFSQIVGIGPQNAYVLRQGIGRSHVLPIVAICIVADVLLIAAGVLGVGKVVAGIPGFISVVTWAGAA
FILWLGFKSFRSALNAGGMTLEGGVERDRKSAIRTILVVTLLNPYVWLDTVVLIGSVSSVYGEHGSLSFLMGSLSASVLW
FGAIGLFAGKLAPLFTKPASWRVLDCVIGFVMLFTASMLVYNYGLSAPLPL

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=200, Percent_Identity=36.5, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22243; Mature: 22243

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFSVFLSALGISFSQIVGIGPQNAYVLRQGIGRSHVLPIVAICIVADVLLIAAGVLGV
CCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GKVVAGIPGFISVVTWAGAAFILWLGFKSFRSALNAGGMTLEGGVERDRKSAIRTILVVT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
LLNPYVWLDTVVLIGSVSSVYGEHGSLSFLMGSLSASVLWFGAIGLFAGKLAPLFTKPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRVLDCVIGFVMLFTASMLVYNYGLSAPLPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFNFSVFLSALGISFSQIVGIGPQNAYVLRQGIGRSHVLPIVAICIVADVLLIAAGVLGV
CCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GKVVAGIPGFISVVTWAGAAFILWLGFKSFRSALNAGGMTLEGGVERDRKSAIRTILVVT
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH
LLNPYVWLDTVVLIGSVSSVYGEHGSLSFLMGSLSASVLWFGAIGLFAGKLAPLFTKPAS
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WRVLDCVIGFVMLFTASMLVYNYGLSAPLPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]