| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498019
Identifier: 34498019
GI number: 34498019
Start: 2765762
End: 2766313
Strand: Reverse
Name: 34498019
Synonym: CV_2564
Alternate gene names: NA
Gene position: 2766313-2765762 (Counterclockwise)
Preceding gene: 34498020
Following gene: 34498018
Centisome position: 58.22
GC content: 65.04
Gene sequence:
>552_bases ATGACAAGGAAAATCATCACGCTGTGCGCGCTTGGCGCGGCCCTGGCAGGCCAGGCCGGCGCGGCGCTGGCCCTGCCGGT GAACAACAGCTACATCCAGTCCAGCGCCAATGAGATCCGGGGCTTCCTCGGCTCTTACGCCCGCCCGACGGTTTATGTCG ACCAGAGGGCCTGCGGCGAGCCGCAATCCAGCGCGATGGCCTGCGGCCCTTACACCATCAGCGTCGGCACTGGTTTCCTG CAGCAGCAGGAAAACAGCTACGGCAACTACGTGGCCAAGTTCATCCTGGCGCACGAGTGGGGCCATTCCGTCCAGTTCAC CCGCGGCATCAACCGCCAGCCGCCGATGCAGGAACTGCAGGCCGACTGCGTGGGGGGCACCTTCGCCAAGTACGCCGAGA CCAATCTGCGCTATTCGAGCTTCATCGAGAATGCGGTGGCTTCGGCGCGCGACGCGGCCGACTACGCCGAGCACGGCACG CCGTCGCAGCGCGACTACTACTCGCGCTACGGTTACGCCAACGGCTTCAACGTCTGCATGACGCGGATCTGA
Upstream 100 bases:
>100_bases ATATCAAATTTAAATTTTATAAAAATTTATTCTTTCCAGAATGATTATTCATTTGCCATAAAAAGATCTCCGTGACGCAA TACTCAAGGAGAAAGAGATC
Downstream 100 bases:
>100_bases CGATGAAGAGGGCAACCGTGTTGATCGCAGCGGCCGCAGGGACGGCGGCCGTGGCGGCATGGCTATGGCTGCCCACTCAC TTCGCGATGGCGGGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTRKIITLCALGAALAGQAGAALALPVNNSYIQSSANEIRGFLGSYARPTVYVDQRACGEPQSSAMACGPYTISVGTGFL QQQENSYGNYVAKFILAHEWGHSVQFTRGINRQPPMQELQADCVGGTFAKYAETNLRYSSFIENAVASARDAADYAEHGT PSQRDYYSRYGYANGFNVCMTRI
Sequences:
>Translated_183_residues MTRKIITLCALGAALAGQAGAALALPVNNSYIQSSANEIRGFLGSYARPTVYVDQRACGEPQSSAMACGPYTISVGTGFL QQQENSYGNYVAKFILAHEWGHSVQFTRGINRQPPMQELQADCVGGTFAKYAETNLRYSSFIENAVASARDAADYAEHGT PSQRDYYSRYGYANGFNVCMTRI >Mature_182_residues TRKIITLCALGAALAGQAGAALALPVNNSYIQSSANEIRGFLGSYARPTVYVDQRACGEPQSSAMACGPYTISVGTGFLQ QQENSYGNYVAKFILAHEWGHSVQFTRGINRQPPMQELQADCVGGTFAKYAETNLRYSSFIENAVASARDAADYAEHGTP SQRDYYSRYGYANGFNVCMTRI
Specific function: Unknown
COG id: COG2321
COG function: function code R; Predicted metalloprotease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19896; Mature: 19765
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKIITLCALGAALAGQAGAALALPVNNSYIQSSANEIRGFLGSYARPTVYVDQRACGE CCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCHHCCC PQSSAMACGPYTISVGTGFLQQQENSYGNYVAKFILAHEWGHSVQFTRGINRQPPMQELQ CCCCCEECCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH ADCVGGTFAKYAETNLRYSSFIENAVASARDAADYAEHGTPSQRDYYSRYGYANGFNVCM HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEE TRI ECC >Mature Secondary Structure TRKIITLCALGAALAGQAGAALALPVNNSYIQSSANEIRGFLGSYARPTVYVDQRACGE CCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCHHCCC PQSSAMACGPYTISVGTGFLQQQENSYGNYVAKFILAHEWGHSVQFTRGINRQPPMQELQ CCCCCEECCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH ADCVGGTFAKYAETNLRYSSFIENAVASARDAADYAEHGTPSQRDYYSRYGYANGFNVCM HHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEE TRI ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA