| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498018
Identifier: 34498018
GI number: 34498018
Start: 2765031
End: 2765759
Strand: Reverse
Name: 34498018
Synonym: CV_2563
Alternate gene names: NA
Gene position: 2765759-2765031 (Counterclockwise)
Preceding gene: 34498019
Following gene: 34498016
Centisome position: 58.21
GC content: 70.1
Gene sequence:
>729_bases ATGAAGAGGGCAACCGTGTTGATCGCAGCGGCCGCAGGGACGGCGGCCGTGGCGGCATGGCTATGGCTGCCCACTCACTT CGCGATGGCGGGCGGCGCGTCCGGACAGGCGCAGCCCGTCGCCACGAAGGGGGGCGGATCGGAAACGGAAGCGGCGGGGA AGGCTGCCAGGCCCGCGGCCGATGGCTTCAGTTTCGCGGTGGGCGGCGACCCGTCGGCGCAGCTGCAGGCGGCCGCCTCG CCGCCGGAAACGCCGGCGGAGCGCGCTCGCAAGCAGGAGCTGCGCAAGCTGGGCTACATGATAGACGCGCGTTATTACCA GATGTCGCTGGCCGACCTGCGCATGGCCGCCAGCCGCGGCGATCCGCAGGCGCTGACGCATCTGGCCGAGCGCTATCTGT TCCAGCTGGACGGCAAGCCCAAAGAGCCCGACTACCAGCCGGACTTCCGCTACCGCGAGGAAGCGCGCGAGGCGTTGCAG CAGGCATACGCGCGCGGCAACCTGCATGCGGCGGCCATCATCTCGGAGAGTTATCTGCTGGACAAGCAGCCGGAAGAGGC TGCCGCCTGGAACCTGGTGGCGCGCCGATCCGGCGACACCCTAAGCGCCGACTGGCTGCTGAAGACCAAGGACTACCAGG CGCTGACCGCGCAGCAGAAAGCCAACGCCGCGCGGCGAGCGGACCAGTTGTGGCAGTCGCTGCAGCGGCGCAAGGCCGCG GCCGGCTAG
Upstream 100 bases:
>100_bases CGGCCGACTACGCCGAGCACGGCACGCCGTCGCAGCGCGACTACTACTCGCGCTACGGTTACGCCAACGGCTTCAACGTC TGCATGACGCGGATCTGACG
Downstream 100 bases:
>100_bases TCTGAGGGGACGCGGCGCTTCAACGCGGCCTGCCGGGCCGCAGCGAAGCGCCGCGCACCTCGAATTTCACCGCCTGCACC ACCTTGCCGTCGCCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKRATVLIAAAAGTAAVAAWLWLPTHFAMAGGASGQAQPVATKGGGSETEAAGKAARPAADGFSFAVGGDPSAQLQAAAS PPETPAERARKQELRKLGYMIDARYYQMSLADLRMAASRGDPQALTHLAERYLFQLDGKPKEPDYQPDFRYREEAREALQ QAYARGNLHAAAIISESYLLDKQPEEAAAWNLVARRSGDTLSADWLLKTKDYQALTAQQKANAARRADQLWQSLQRRKAA AG
Sequences:
>Translated_242_residues MKRATVLIAAAAGTAAVAAWLWLPTHFAMAGGASGQAQPVATKGGGSETEAAGKAARPAADGFSFAVGGDPSAQLQAAAS PPETPAERARKQELRKLGYMIDARYYQMSLADLRMAASRGDPQALTHLAERYLFQLDGKPKEPDYQPDFRYREEAREALQ QAYARGNLHAAAIISESYLLDKQPEEAAAWNLVARRSGDTLSADWLLKTKDYQALTAQQKANAARRADQLWQSLQRRKAA AG >Mature_242_residues MKRATVLIAAAAGTAAVAAWLWLPTHFAMAGGASGQAQPVATKGGGSETEAAGKAARPAADGFSFAVGGDPSAQLQAAAS PPETPAERARKQELRKLGYMIDARYYQMSLADLRMAASRGDPQALTHLAERYLFQLDGKPKEPDYQPDFRYREEAREALQ QAYARGNLHAAAIISESYLLDKQPEEAAAWNLVARRSGDTLSADWLLKTKDYQALTAQQKANAARRADQLWQSLQRRKAA AG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26131; Mature: 26131
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRATVLIAAAAGTAAVAAWLWLPTHFAMAGGASGQAQPVATKGGGSETEAAGKAARPAA CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCC DGFSFAVGGDPSAQLQAAASPPETPAERARKQELRKLGYMIDARYYQMSLADLRMAASRG CCCEEEECCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPQALTHLAERYLFQLDGKPKEPDYQPDFRYREEAREALQQAYARGNLHAAAIISESYLL CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC DKQPEEAAAWNLVARRSGDTLSADWLLKTKDYQALTAQQKANAARRADQLWQSLQRRKAA CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AG CC >Mature Secondary Structure MKRATVLIAAAAGTAAVAAWLWLPTHFAMAGGASGQAQPVATKGGGSETEAAGKAARPAA CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHCCCCCCCCC DGFSFAVGGDPSAQLQAAASPPETPAERARKQELRKLGYMIDARYYQMSLADLRMAASRG CCCEEEECCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPQALTHLAERYLFQLDGKPKEPDYQPDFRYREEAREALQQAYARGNLHAAAIISESYLL CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC DKQPEEAAAWNLVARRSGDTLSADWLLKTKDYQALTAQQKANAARRADQLWQSLQRRKAA CCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA