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The map label for this gene is yebS [H]

Identifier: 34498004

GI number: 34498004

Start: 2742576

End: 2743157

Strand: Reverse

Name: yebS [H]

Synonym: CV_2549

Alternate gene names: 34498004

Gene position: 2743157-2742576 (Counterclockwise)

Preceding gene: 34498005

Following gene: 34498003

Centisome position: 57.74

GC content: 69.93

Gene sequence:

>582_bases
CTGCTGCTGCGCCTGCCCGGCGCGCAGGCCGGGCGGGTGTGCGTGCATTGCCCGCGCTGCGGCGCCCAGCTGTACGAGTA
CTCGGACAGCGGGCCGCAGGCCGGCGTGGCGCTGCTGGCGGCGGGCGCGGTGATGTTCGCGATCGCCAACGTCTACCCGG
TGCTGGTGCTGGAAATCGCCGGCAACCGCAACGCCGCCACCCTGTGGCAGACCGCGCTGGCGCTGCATGGGCAGGGCATG
CCGGAGGTGGCGCTGCTGGTGCTGTTCACCGGCATCGTGATGCCGGCGCTGGAGTTGGCCAGCATGCTCTACCTGCAGCT
GCCGCTGCTGTTCGGCCGCGCGTTGCCGGGCTTTCCGGCGATGATGCGGCTGCGCGGGCTGGCGCGCCCCTGGTGCATGG
TGGAGGTCTTCCTGCTGGGGGTGCTGGTTTCGCTGGTCAAGCTGGTCCATCTCGCCAGCGTGCAGCCCGGCATCGGCCTG
TGGGCGTTTTTCGGCCTGATCGTGATGATGGCGGCCAGCGCCAGCCGCTTCCGGCCGCATCAATTATGGGAACGTTACCA
GTCATGCCGCGCTACCCCTTGA

Upstream 100 bases:

>100_bases
ATTACATGGATACCGGCGAGGCGCGCGCCTGGCCAAGCTTCACCGCGGAGCGCAAGCGCAGATGGACGGTGTGAGCCTGA
CGGCCTGCCATGATTGCGAC

Downstream 100 bases:

>100_bases
ACAGCGCGGCCGCGCGCAATCTGTGCCTGTGCCATGGCTGCGGGCTGCTGGTGAGGCTGCCTCCGCGCGAGGCGGGCGTC
TGCCCGCGCTGCGCCGCGCC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLLRLPGAQAGRVCVHCPRCGAQLYEYSDSGPQAGVALLAAGAVMFAIANVYPVLVLEIAGNRNAATLWQTALALHGQGM
PEVALLVLFTGIVMPALELASMLYLQLPLLFGRALPGFPAMMRLRGLARPWCMVEVFLLGVLVSLVKLVHLASVQPGIGL
WAFFGLIVMMAASASRFRPHQLWERYQSCRATP

Sequences:

>Translated_193_residues
MLLRLPGAQAGRVCVHCPRCGAQLYEYSDSGPQAGVALLAAGAVMFAIANVYPVLVLEIAGNRNAATLWQTALALHGQGM
PEVALLVLFTGIVMPALELASMLYLQLPLLFGRALPGFPAMMRLRGLARPWCMVEVFLLGVLVSLVKLVHLASVQPGIGL
WAFFGLIVMMAASASRFRPHQLWERYQSCRATP
>Mature_193_residues
MLLRLPGAQAGRVCVHCPRCGAQLYEYSDSGPQAGVALLAAGAVMFAIANVYPVLVLEIAGNRNAATLWQTALALHGQGM
PEVALLVLFTGIVMPALELASMLYLQLPLLFGRALPGFPAMMRLRGLARPWCMVEVFLLGVLVSLVKLVHLASVQPGIGL
WAFFGLIVMMAASASRFRPHQLWERYQSCRATP

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=186, Percent_Identity=26.8817204301075, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 20857; Mature: 20857

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRLPGAQAGRVCVHCPRCGAQLYEYSDSGPQAGVALLAAGAVMFAIANVYPVLVLEIA
CEEECCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GNRNAATLWQTALALHGQGMPEVALLVLFTGIVMPALELASMLYLQLPLLFGRALPGFPA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MMRLRGLARPWCMVEVFLLGVLVSLVKLVHLASVQPGIGLWAFFGLIVMMAASASRFRPH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH
QLWERYQSCRATP
HHHHHHHHCCCCC
>Mature Secondary Structure
MLLRLPGAQAGRVCVHCPRCGAQLYEYSDSGPQAGVALLAAGAVMFAIANVYPVLVLEIA
CEEECCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEC
GNRNAATLWQTALALHGQGMPEVALLVLFTGIVMPALELASMLYLQLPLLFGRALPGFPA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MMRLRGLARPWCMVEVFLLGVLVSLVKLVHLASVQPGIGLWAFFGLIVMMAASASRFRPH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH
QLWERYQSCRATP
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]