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The map label for this gene is pqiA [H]

Identifier: 34498003

GI number: 34498003

Start: 2741959

End: 2742579

Strand: Reverse

Name: pqiA [H]

Synonym: CV_2548

Alternate gene names: 34498003

Gene position: 2742579-2741959 (Counterclockwise)

Preceding gene: 34498004

Following gene: 34498002

Centisome position: 57.73

GC content: 66.18

Gene sequence:

>621_bases
TTGAACAGCGCGGCCGCGCGCAATCTGTGCCTGTGCCATGGCTGCGGGCTGCTGGTGAGGCTGCCTCCGCGCGAGGCGGG
CGTCTGCCCGCGCTGCGCCGCGCCGCTGCATTTGCGGCGGCCGGCTGCGCTGCAGCGCTGCTGGGCGCTGCTGCTGGCGG
CGATGATCAGCTATCTGCCGGCCAATCTGCTGCCCATCATGGAAACCACGGCGCTGACCGGCGTGCAGCGCGACACCATC
ATGAGCGGCGTGGTCTACTTGTGGAACAATGATTCCTGGCCGCTGGCGCTGGTGGTGTTCACCGCCAGTGTGCTGGTGCC
GCTGCTGAAGATACTGGCCTTGCTGCTGTTGTTGTGCAGCGTGCAGTGGCGTTGGAGCTGGGCACCGCGCCAGCGGACGC
GGCTGTACCGGATGATAGAAGTGATCGGCCCGTGGTCGATGCTGGACATTTTCGTGGTGGCGCTGATGGTGGCGCTGGTG
CAATGGCAGTCGCTGGCCAGCATCAAGGCCGGGCCGGGGGCGATCGCCTTCGGCGCGGTGGTGGTGCTGACCATGCTGGC
CGCGATGAGTTTCGATCCCAGGATGATCTGGGATCCGGTAGAGGAACACGATGAGCAGTGA

Upstream 100 bases:

>100_bases
TGTGGGCGTTTTTCGGCCTGATCGTGATGATGGCGGCCAGCGCCAGCCGCTTCCGGCCGCATCAATTATGGGAACGTTAC
CAGTCATGCCGCGCTACCCC

Downstream 100 bases:

>100_bases
CAATCCACAAAAACCGGAGCAGGACGATCTGCCGCAGGCGGTGCCGGTGCGCCGCCGTCGCTGGGCGCCGTCGCTGGTCT
GGCTGATCCCGGTGGTGGCG

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNSAAARNLCLCHGCGLLVRLPPREAGVCPRCAAPLHLRRPAALQRCWALLLAAMISYLPANLLPIMETTALTGVQRDTI
MSGVVYLWNNDSWPLALVVFTASVLVPLLKILALLLLLCSVQWRWSWAPRQRTRLYRMIEVIGPWSMLDIFVVALMVALV
QWQSLASIKAGPGAIAFGAVVVLTMLAAMSFDPRMIWDPVEEHDEQ

Sequences:

>Translated_206_residues
MNSAAARNLCLCHGCGLLVRLPPREAGVCPRCAAPLHLRRPAALQRCWALLLAAMISYLPANLLPIMETTALTGVQRDTI
MSGVVYLWNNDSWPLALVVFTASVLVPLLKILALLLLLCSVQWRWSWAPRQRTRLYRMIEVIGPWSMLDIFVVALMVALV
QWQSLASIKAGPGAIAFGAVVVLTMLAAMSFDPRMIWDPVEEHDEQ
>Mature_206_residues
MNSAAARNLCLCHGCGLLVRLPPREAGVCPRCAAPLHLRRPAALQRCWALLLAAMISYLPANLLPIMETTALTGVQRDTI
MSGVVYLWNNDSWPLALVVFTASVLVPLLKILALLLLLCSVQWRWSWAPRQRTRLYRMIEVIGPWSMLDIFVVALMVALV
QWQSLASIKAGPGAIAFGAVVVLTMLAAMSFDPRMIWDPVEEHDEQ

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=199, Percent_Identity=42.2110552763819, Blast_Score=150, Evalue=4e-38,
Organism=Escherichia coli, GI1787183, Length=196, Percent_Identity=40.3061224489796, Blast_Score=150, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 22843; Mature: 22843

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAAARNLCLCHGCGLLVRLPPREAGVCPRCAAPLHLRRPAALQRCWALLLAAMISYLP
CCCHHHHCHHHEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ANLLPIMETTALTGVQRDTIMSGVVYLWNNDSWPLALVVFTASVLVPLLKILALLLLLCS
HHHHHHHHHHHHHCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VQWRWSWAPRQRTRLYRMIEVIGPWSMLDIFVVALMVALVQWQSLASIKAGPGAIAFGAV
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VVLTMLAAMSFDPRMIWDPVEEHDEQ
HHHHHHHHHCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MNSAAARNLCLCHGCGLLVRLPPREAGVCPRCAAPLHLRRPAALQRCWALLLAAMISYLP
CCCHHHHCHHHEECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ANLLPIMETTALTGVQRDTIMSGVVYLWNNDSWPLALVVFTASVLVPLLKILALLLLLCS
HHHHHHHHHHHHHCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VQWRWSWAPRQRTRLYRMIEVIGPWSMLDIFVVALMVALVQWQSLASIKAGPGAIAFGAV
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VVLTMLAAMSFDPRMIWDPVEEHDEQ
HHHHHHHHHCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]