| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497969
Identifier: 34497969
GI number: 34497969
Start: 2706677
End: 2707399
Strand: Reverse
Name: 34497969
Synonym: CV_2514
Alternate gene names: NA
Gene position: 2707399-2706677 (Counterclockwise)
Preceding gene: 34497970
Following gene: 34497968
Centisome position: 56.98
GC content: 66.39
Gene sequence:
>723_bases ATGTTGCTGCTGCTGCCCCCGCTGTCCGTCGCGGGGGAGCGCCCGCTGGAGCTGGTCACGCTGCAGTACCCGCCTTATCA ATATCAGGAAGGCGCCGGGGTCAAGGGCTTCGTGGTGGACATCGTGCGCGAGGCCTTCAGCCGCATGGGGCGGACGGTCC ACGTCAGCGTCTATCCCTGGGGGAGGTCGCTGGCGATGGTGGAGACCGGGCAAGCGGATGCGATATTCACCCTGTACAAG ACACCCGAGAGAGAGGCTCGGCTGGACTATTCCCGGCAGACGCTGATGCCGCAGGCGGTGTCGCTGTTCGTGCTGCAGGA TTCGACCATCCGTTTCGACGGCCGGCTGGGCCAGCTCTCAGGCTACCGCTTCGGCGTGGTGAGGTCCGTCAGCTATGGCG CCGTCTTCGACACGGCGGCGCGTCAGGGGCTTATCCGCATCGCGGAAACGGCCGCCAGCGGCGAGCAGAACATGGAGAAG CTGGTCGCGAGGCGCTTCGACATCCTGGTCAGCAACCGACTCGGCGCCTGGGACATCATCCGCCGGCAGCATGTTGAAGG CTTGGTGCGAGAACTGCAGCCGCCGGTCGAGCGGATTCCCAGTTATATCGCCTTCGCGCGCAAGCCGGACCTTGCCGGCG TGCGCGACCGATTCGACGCCGAACTGGAGGGCATGAAGCGGGACGGCAGCTACGCCCGCCTGGTTTCCGCCGCCGACCCC TGA
Upstream 100 bases:
>100_bases GTTCCGGCCGGTCTGACCCCAACGGGGACGCTCCTGCGCCGGAGCGTCCCCGTTTTCTTTTTGGAGAGCGCGCATCTTGG CTCGGCTGATGGTGATGCTG
Downstream 100 bases:
>100_bases ATTCCTGCGCTTTCCTTGACAGTCCTGTTGACGGCAACTTAAGTGAAACCATGTGCCAGCGGGTATTGCTTGTAATGGCC CGGATGGTAATCACAAATGG
Product: amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Amino Acid ABC Transporter; Sugar ABC Transporter Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction System
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLLLLPPLSVAGERPLELVTLQYPPYQYQEGAGVKGFVVDIVREAFSRMGRTVHVSVYPWGRSLAMVETGQADAIFTLYK TPEREARLDYSRQTLMPQAVSLFVLQDSTIRFDGRLGQLSGYRFGVVRSVSYGAVFDTAARQGLIRIAETAASGEQNMEK LVARRFDILVSNRLGAWDIIRRQHVEGLVRELQPPVERIPSYIAFARKPDLAGVRDRFDAELEGMKRDGSYARLVSAADP
Sequences:
>Translated_240_residues MLLLLPPLSVAGERPLELVTLQYPPYQYQEGAGVKGFVVDIVREAFSRMGRTVHVSVYPWGRSLAMVETGQADAIFTLYK TPEREARLDYSRQTLMPQAVSLFVLQDSTIRFDGRLGQLSGYRFGVVRSVSYGAVFDTAARQGLIRIAETAASGEQNMEK LVARRFDILVSNRLGAWDIIRRQHVEGLVRELQPPVERIPSYIAFARKPDLAGVRDRFDAELEGMKRDGSYARLVSAADP >Mature_240_residues MLLLLPPLSVAGERPLELVTLQYPPYQYQEGAGVKGFVVDIVREAFSRMGRTVHVSVYPWGRSLAMVETGQADAIFTLYK TPEREARLDYSRQTLMPQAVSLFVLQDSTIRFDGRLGQLSGYRFGVVRSVSYGAVFDTAARQGLIRIAETAASGEQNMEK LVARRFDILVSNRLGAWDIIRRQHVEGLVRELQPPVERIPSYIAFARKPDLAGVRDRFDAELEGMKRDGSYARLVSAADP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26894; Mature: 26894
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLLPPLSVAGERPLELVTLQYPPYQYQEGAGVKGFVVDIVREAFSRMGRTVHVSVYPW CEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC GRSLAMVETGQADAIFTLYKTPEREARLDYSRQTLMPQAVSLFVLQDSTIRFDGRLGQLS CCEEEEEECCCCCEEEEEECCCCHHHHCCHHHHHHCHHHEEEEEEECCEEEECCCCCCCC GYRFGVVRSVSYGAVFDTAARQGLIRIAETAASGEQNMEKLVARRFDILVSNRLGAWDII CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH RRQHVEGLVRELQPPVERIPSYIAFARKPDLAGVRDRFDAELEGMKRDGSYARLVSAADP HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure MLLLLPPLSVAGERPLELVTLQYPPYQYQEGAGVKGFVVDIVREAFSRMGRTVHVSVYPW CEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC GRSLAMVETGQADAIFTLYKTPEREARLDYSRQTLMPQAVSLFVLQDSTIRFDGRLGQLS CCEEEEEECCCCCEEEEEECCCCHHHHCCHHHHHHCHHHEEEEEEECCEEEECCCCCCCC GYRFGVVRSVSYGAVFDTAARQGLIRIAETAASGEQNMEKLVARRFDILVSNRLGAWDII CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHH RRQHVEGLVRELQPPVERIPSYIAFARKPDLAGVRDRFDAELEGMKRDGSYARLVSAADP HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA