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The map label for this gene is mcpA [H]

Identifier: 34497968

GI number: 34497968

Start: 2705375

End: 2706523

Strand: Reverse

Name: mcpA [H]

Synonym: CV_2513

Alternate gene names: 34497968

Gene position: 2706523-2705375 (Counterclockwise)

Preceding gene: 34497969

Following gene: 34497967

Centisome position: 56.97

GC content: 67.97

Gene sequence:

>1149_bases
ATGGGAAACAGGAGCAAATCGCTGCTCGTCTTCGCCGGGCTATGCCTGGCGTCGGCGGCGGCGTTGGTGTGGGTTTCGCC
CTGGCTGGGCTGGTTGATCCCGGTGCTGGGCGGCGGCGGGCTGCTGCTGTTCCATGGCGGGGGCGGGGAAGCCCCGCCGC
CTGCAAACCAGCCTTCGGCCGCCGCGCCGGCCGCATCCGACGATGACGGCCAGCTCGAGTTGCTGCTGCAGGTGATCGCG
CGCTGGGAGGGCAATCTGCAACTGGTGATCGAGCAGTCGGTCACCGGCGGCAACCAGTTGGCGGGCACGCTGACCGGCAT
CGCCGATGGCCTGCACGCCACCATAGAGGCGGCGGGCTCGGCTGCCGACGACATCGGCAGCGGCAGCCTGGAGCAGATGG
TGGCGGATGCCAGCCAGCGCAGCCGGGAGATATCGTCCGTGCTGGCGGAGATCGTCGGCCACCGCCAGCAACTGATCGAC
GAAGTCTCCCGCCTCGCCACCTATTCCGGCGAATTGCTGTCCATGGCGGACCAGGTCGGCCGCATTTCCAACCAGACCAA
TCTGCTGGCACTGAACGCCAGCATCGAGGCCGCGCGCGCCGGCGAATTCGGCCGCGGCTTCGCCGTGGTGGCCGACGAGG
TGCGCAAGCTGTCGCAGCAATCCGAGCAGACCGGCAAGCAGATGTCGGAAAAGGTGGTCGAGATCAACGGCGCGCTGGAG
CAGACCCGCCAGACCACCACCAGCCTGGGCGCGCAGGACGCGGACCGCGGCAACAACGCGCTGGGGCTGCTGGACGAATC
GGTGAGGGACTTCAGCGCGGCGGCGGAAAAACTGGCCCAGGTCAATCAAAGGATGCAGACCGAAGGCTCCCGCGTCGAGA
AGGAGCTGCATGCCTCGCTGATCGCGCTGCAATTCCAGGACCGGGTCAGCCAGATCGTCCAGCATGTCGCGCAGGATCTG
AAGCAGATGCAGGCCCACCTCGAGGCGGTGCGCGAAGCGCGCCGGCGCGGGGAGAAGGGGCCGGAGGCGCATCCCCGGGA
GTGGCTGAAGCGCCTCGAATCCACCTATACCACGCTGGAACAGGCGGCCCTGCATCAGGGCGGCGGCGGCAAGCCTGCGG
CTTCCAGCGGCGATGTCGACTTTTTCTGA

Upstream 100 bases:

>100_bases
TGCCAGCGGGTATTGCTTGTAATGGCCCGGATGGTAATCACAAATGGCATGGCCGGCGCGGCCATTGCCGAACATGCGGT
TCTCCTTGGCGGGGGGATGG

Downstream 100 bases:

>100_bases
TGCCGCGGCATCGGATCACCCCACCTGGAGGAGTTCATGGGTAAATCCATCCTGATCGTCGATGACGCCGCCAGCATCCG
CGCGACCGTCAGCATCGCGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H1 [H]

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MGNRSKSLLVFAGLCLASAAALVWVSPWLGWLIPVLGGGGLLLFHGGGGEAPPPANQPSAAAPAASDDDGQLELLLQVIA
RWEGNLQLVIEQSVTGGNQLAGTLTGIADGLHATIEAAGSAADDIGSGSLEQMVADASQRSREISSVLAEIVGHRQQLID
EVSRLATYSGELLSMADQVGRISNQTNLLALNASIEAARAGEFGRGFAVVADEVRKLSQQSEQTGKQMSEKVVEINGALE
QTRQTTTSLGAQDADRGNNALGLLDESVRDFSAAAEKLAQVNQRMQTEGSRVEKELHASLIALQFQDRVSQIVQHVAQDL
KQMQAHLEAVREARRRGEKGPEAHPREWLKRLESTYTTLEQAALHQGGGGKPAASSGDVDFF

Sequences:

>Translated_382_residues
MGNRSKSLLVFAGLCLASAAALVWVSPWLGWLIPVLGGGGLLLFHGGGGEAPPPANQPSAAAPAASDDDGQLELLLQVIA
RWEGNLQLVIEQSVTGGNQLAGTLTGIADGLHATIEAAGSAADDIGSGSLEQMVADASQRSREISSVLAEIVGHRQQLID
EVSRLATYSGELLSMADQVGRISNQTNLLALNASIEAARAGEFGRGFAVVADEVRKLSQQSEQTGKQMSEKVVEINGALE
QTRQTTTSLGAQDADRGNNALGLLDESVRDFSAAAEKLAQVNQRMQTEGSRVEKELHASLIALQFQDRVSQIVQHVAQDL
KQMQAHLEAVREARRRGEKGPEAHPREWLKRLESTYTTLEQAALHQGGGGKPAASSGDVDFF
>Mature_381_residues
GNRSKSLLVFAGLCLASAAALVWVSPWLGWLIPVLGGGGLLLFHGGGGEAPPPANQPSAAAPAASDDDGQLELLLQVIAR
WEGNLQLVIEQSVTGGNQLAGTLTGIADGLHATIEAAGSAADDIGSGSLEQMVADASQRSREISSVLAEIVGHRQQLIDE
VSRLATYSGELLSMADQVGRISNQTNLLALNASIEAARAGEFGRGFAVVADEVRKLSQQSEQTGKQMSEKVVEINGALEQ
TRQTTTSLGAQDADRGNNALGLLDESVRDFSAAAEKLAQVNQRMQTEGSRVEKELHASLIALQFQDRVSQIVQHVAQDLK
QMQAHLEAVREARRRGEKGPEAHPREWLKRLESTYTTLEQAALHQGGGGKPAASSGDVDFF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=135, Percent_Identity=37.037037037037, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787690, Length=64, Percent_Identity=51.5625, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788195, Length=175, Percent_Identity=31.4285714285714, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI2367378, Length=240, Percent_Identity=28.3333333333333, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 40451; Mature: 40320

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRSKSLLVFAGLCLASAAALVWVSPWLGWLIPVLGGGGLLLFHGGGGEAPPPANQPSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
AAPAASDDDGQLELLLQVIARWEGNLQLVIEQSVTGGNQLAGTLTGIADGLHATIEAAGS
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
AADDIGSGSLEQMVADASQRSREISSVLAEIVGHRQQLIDEVSRLATYSGELLSMADQVG
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
RISNQTNLLALNASIEAARAGEFGRGFAVVADEVRKLSQQSEQTGKQMSEKVVEINGALE
HCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTRQTTTSLGAQDADRGNNALGLLDESVRDFSAAAEKLAQVNQRMQTEGSRVEKELHASL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALQFQDRVSQIVQHVAQDLKQMQAHLEAVREARRRGEKGPEAHPREWLKRLESTYTTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QAALHQGGGGKPAASSGDVDFF
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GNRSKSLLVFAGLCLASAAALVWVSPWLGWLIPVLGGGGLLLFHGGGGEAPPPANQPSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
AAPAASDDDGQLELLLQVIARWEGNLQLVIEQSVTGGNQLAGTLTGIADGLHATIEAAGS
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
AADDIGSGSLEQMVADASQRSREISSVLAEIVGHRQQLIDEVSRLATYSGELLSMADQVG
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
RISNQTNLLALNASIEAARAGEFGRGFAVVADEVRKLSQQSEQTGKQMSEKVVEINGALE
HCCCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTRQTTTSLGAQDADRGNNALGLLDESVRDFSAAAEKLAQVNQRMQTEGSRVEKELHASL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALQFQDRVSQIVQHVAQDLKQMQAHLEAVREARRRGEKGPEAHPREWLKRLESTYTTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
QAALHQGGGGKPAASSGDVDFF
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]