Click here to switch to the map view.

The map label for this gene is trg [H]

Identifier: 34497964

GI number: 34497964

Start: 2700786

End: 2702450

Strand: Reverse

Name: trg [H]

Synonym: CV_2509

Alternate gene names: 34497964

Gene position: 2702450-2700786 (Counterclockwise)

Preceding gene: 34497965

Following gene: 34497963

Centisome position: 56.88

GC content: 64.26

Gene sequence:

>1665_bases
ATGACTTCCTTTCACAATACGCAGGTCCACATCAAGCTGGCGATAGGCTACGGCATCATTCTGCTGCTGATGCTGGCCAT
CCTGCTGGTGGGCATACGCGGCATGGTGGCCATGAGCGCCAATACCAACGAGATCGTTTCGGATCGTTATGTCAAGGTGT
CGCTGTCCAACGACATCATGCAGAACACGCTGAACAACGGCCGCTACGTGCGCAACCTGCTATTGCTGACGGAGCCGGCC
GAAATCGAAAAGACCAAGCAGTCGATCGCCAAGCTGCGCGACGATAACAAGCAGTTGCTGCAGAAGCTGGACCGCCTGAT
CGACACGACCAGAGGACGCGAGCTGTACGACAAGATCGTGTCCGCCCGCGACAATCTGAATCTCAAGTACGGCGAACTGT
ACGCGCTGCTGGGCAAGGACCACGCGCAGGCGGTCACTTACCTGCTCAAGGAATTCGCCCCGGCCAACAACACGCTGATC
ACGGCCCTGGACGAAATGGGCGCTTTCCAGGCGCAGCAAATGAAGGATTTGAGCCACGAGGCGGCGGCCAGCGCGGAGAG
CGCGCGCAACCTGATGATTTCGATAGGCGTCGCGGCGCTGGTGGTGACCGTGCTGCTGGCGCTGGCCATCATCCGCAGCA
TACTGCGCCAGCTGGGCGGCGACCCGTCCTACGCGATGCAGGTGGTGTCGCGGGTGGCGGACGGCGACCTGGCGGTGCCG
ATCAAGCTGCGCCCCAATGACAACAGCAGCCTGCTGTACTCGATTCGCGGCATGGCGCACCGGTTGTCCGACACCCTGGC
CGAGGTGAGTTCGATGTCCGAGTCGATAGGCGCGGCGTCGGAACAGGTGGCCTCCACCGCCAGCTCGCTGGCGCAGACGG
CGTCGGAGCTGGCGTCCAGCGTGGAGGAGACCAGCGCCTCGGTCGAGGAAATGGCCTCCACCGTCACCCAGAACGCCGAC
AACGCCCGGGTGACGGAGGGCATCGCGTCCAAGTCGGCCGACAGCGCCACCGAGAGCGGCAAGGCGGTGGGCGACATGGT
GCACGCGATGAAGGAAATCGCTTCGCGCATCACCGTGATCAACGACATCGCCAACAAGACCGACCTGCTGGCGATCAACG
CCGCGATCGAGGCGGCCCGCGCCGGCGAGCACGGCAAGGGCTTCGCCACCGTGGCGGTGGAGGTGCGCAAGCTGGCGGAA
CGCTCCCAGGTGGCCGCCAGGGAGATCGGCGATCTGGCCGGACGGTCGGTCAGCGTCGCCGAGCGCGCCGGCGTCCAATT
GCAGGACATGCTGCCGGGCATAGACCAGACCGCCTCCCTGGTGCAGGAAATCTCCGCCGCCTCGCGCGAGCAGCGCACCG
GCATCGACCAGATCAATACAGCGGTATCGCAGATCAGCACCGGCATGCAATCGTCGGCTTCGTCGGCGGAAGAGTTGAGC
TCGACCTCGGAAGAGCTCAGCTCGGCGGCGATGCAGCTGCAGGACCTGATGCAGCAGTTCAAGCTGCGCAGCGCCCGCAA
TGCGCGCAAGAGCGTGATGATGCATTCCGGCGGGCATGGCGGCCAGGGCGGGAGCGGCCACAAGGCGGCCCCGCCGCCGT
CCGCCCACGCCTTCGACGAAGATTTCGATGAAGAAGTGGACGACGGCAAGTTTTCCAAATACTGA

Upstream 100 bases:

>100_bases
CCACGCCTGCCGGCGCGAGCGCAGGCTGATCAGGCAAAACGCCGAGGCATTGCTGGGCGACAAGCAATAAGACCTACATT
CGGGGTTCCAGGAGACAAAC

Downstream 100 bases:

>100_bases
GGAGCATGGCCATGAGCGAGCGTTCCGATCCGGCAGGCGCGGCGCAGGGCGGCAAGTTCCACTGCGTTACCTTCATCCTG
GGCGAGGACCTGTTCGGCAT

Product: methyl-accepting chemotaxis transducer transmembrane protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MTSFHNTQVHIKLAIGYGIILLLMLAILLVGIRGMVAMSANTNEIVSDRYVKVSLSNDIMQNTLNNGRYVRNLLLLTEPA
EIEKTKQSIAKLRDDNKQLLQKLDRLIDTTRGRELYDKIVSARDNLNLKYGELYALLGKDHAQAVTYLLKEFAPANNTLI
TALDEMGAFQAQQMKDLSHEAAASAESARNLMISIGVAALVVTVLLALAIIRSILRQLGGDPSYAMQVVSRVADGDLAVP
IKLRPNDNSSLLYSIRGMAHRLSDTLAEVSSMSESIGAASEQVASTASSLAQTASELASSVEETSASVEEMASTVTQNAD
NARVTEGIASKSADSATESGKAVGDMVHAMKEIASRITVINDIANKTDLLAINAAIEAARAGEHGKGFATVAVEVRKLAE
RSQVAAREIGDLAGRSVSVAERAGVQLQDMLPGIDQTASLVQEISAASREQRTGIDQINTAVSQISTGMQSSASSAEELS
STSEELSSAAMQLQDLMQQFKLRSARNARKSVMMHSGGHGGQGGSGHKAAPPPSAHAFDEDFDEEVDDGKFSKY

Sequences:

>Translated_554_residues
MTSFHNTQVHIKLAIGYGIILLLMLAILLVGIRGMVAMSANTNEIVSDRYVKVSLSNDIMQNTLNNGRYVRNLLLLTEPA
EIEKTKQSIAKLRDDNKQLLQKLDRLIDTTRGRELYDKIVSARDNLNLKYGELYALLGKDHAQAVTYLLKEFAPANNTLI
TALDEMGAFQAQQMKDLSHEAAASAESARNLMISIGVAALVVTVLLALAIIRSILRQLGGDPSYAMQVVSRVADGDLAVP
IKLRPNDNSSLLYSIRGMAHRLSDTLAEVSSMSESIGAASEQVASTASSLAQTASELASSVEETSASVEEMASTVTQNAD
NARVTEGIASKSADSATESGKAVGDMVHAMKEIASRITVINDIANKTDLLAINAAIEAARAGEHGKGFATVAVEVRKLAE
RSQVAAREIGDLAGRSVSVAERAGVQLQDMLPGIDQTASLVQEISAASREQRTGIDQINTAVSQISTGMQSSASSAEELS
STSEELSSAAMQLQDLMQQFKLRSARNARKSVMMHSGGHGGQGGSGHKAAPPPSAHAFDEDFDEEVDDGKFSKY
>Mature_553_residues
TSFHNTQVHIKLAIGYGIILLLMLAILLVGIRGMVAMSANTNEIVSDRYVKVSLSNDIMQNTLNNGRYVRNLLLLTEPAE
IEKTKQSIAKLRDDNKQLLQKLDRLIDTTRGRELYDKIVSARDNLNLKYGELYALLGKDHAQAVTYLLKEFAPANNTLIT
ALDEMGAFQAQQMKDLSHEAAASAESARNLMISIGVAALVVTVLLALAIIRSILRQLGGDPSYAMQVVSRVADGDLAVPI
KLRPNDNSSLLYSIRGMAHRLSDTLAEVSSMSESIGAASEQVASTASSLAQTASELASSVEETSASVEEMASTVTQNADN
ARVTEGIASKSADSATESGKAVGDMVHAMKEIASRITVINDIANKTDLLAINAAIEAARAGEHGKGFATVAVEVRKLAER
SQVAAREIGDLAGRSVSVAERAGVQLQDMLPGIDQTASLVQEISAASREQRTGIDQINTAVSQISTGMQSSASSAEELSS
TSEELSSAAMQLQDLMQQFKLRSARNARKSVMMHSGGHGGQGGSGHKAAPPPSAHAFDEDFDEEVDDGKFSKY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=536, Percent_Identity=28.9179104477612, Blast_Score=161, Evalue=1e-40,
Organism=Escherichia coli, GI1788194, Length=363, Percent_Identity=34.7107438016529, Blast_Score=158, Evalue=9e-40,
Organism=Escherichia coli, GI2367378, Length=311, Percent_Identity=34.7266881028939, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI1788195, Length=286, Percent_Identity=38.1118881118881, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1789453, Length=242, Percent_Identity=33.4710743801653, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59104; Mature: 58972

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFHNTQVHIKLAIGYGIILLLMLAILLVGIRGMVAMSANTNEIVSDRYVKVSLSNDIM
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCEEEEEECHHHH
QNTLNNGRYVRNLLLLTEPAEIEKTKQSIAKLRDDNKQLLQKLDRLIDTTRGRELYDKIV
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
SARDNLNLKYGELYALLGKDHAQAVTYLLKEFAPANNTLITALDEMGAFQAQQMKDLSHE
HHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
AAASAESARNLMISIGVAALVVTVLLALAIIRSILRQLGGDPSYAMQVVSRVADGDLAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
IKLRPNDNSSLLYSIRGMAHRLSDTLAEVSSMSESIGAASEQVASTASSLAQTASELASS
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEETSASVEEMASTVTQNADNARVTEGIASKSADSATESGKAVGDMVHAMKEIASRITVI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NDIANKTDLLAINAAIEAARAGEHGKGFATVAVEVRKLAERSQVAAREIGDLAGRSVSVA
HHHCCCHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ERAGVQLQDMLPGIDQTASLVQEISAASREQRTGIDQINTAVSQISTGMQSSASSAEELS
HHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
STSEELSSAAMQLQDLMQQFKLRSARNARKSVMMHSGGHGGQGGSGHKAAPPPSAHAFDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
DFDEEVDDGKFSKY
HHHHHCCCCCCCCC
>Mature Secondary Structure 
TSFHNTQVHIKLAIGYGIILLLMLAILLVGIRGMVAMSANTNEIVSDRYVKVSLSNDIM
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCEEEEEECHHHH
QNTLNNGRYVRNLLLLTEPAEIEKTKQSIAKLRDDNKQLLQKLDRLIDTTRGRELYDKIV
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH
SARDNLNLKYGELYALLGKDHAQAVTYLLKEFAPANNTLITALDEMGAFQAQQMKDLSHE
HHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHH
AAASAESARNLMISIGVAALVVTVLLALAIIRSILRQLGGDPSYAMQVVSRVADGDLAVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEE
IKLRPNDNSSLLYSIRGMAHRLSDTLAEVSSMSESIGAASEQVASTASSLAQTASELASS
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEETSASVEEMASTVTQNADNARVTEGIASKSADSATESGKAVGDMVHAMKEIASRITVI
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NDIANKTDLLAINAAIEAARAGEHGKGFATVAVEVRKLAERSQVAAREIGDLAGRSVSVA
HHHCCCHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ERAGVQLQDMLPGIDQTASLVQEISAASREQRTGIDQINTAVSQISTGMQSSASSAEELS
HHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
STSEELSSAAMQLQDLMQQFKLRSARNARKSVMMHSGGHGGQGGSGHKAAPPPSAHAFDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
DFDEEVDDGKFSKY
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]