| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cheW1 [H]
Identifier: 34497963
GI number: 34497963
Start: 2700235
End: 2700774
Strand: Reverse
Name: cheW1 [H]
Synonym: CV_2508
Alternate gene names: 34497963
Gene position: 2700774-2700235 (Counterclockwise)
Preceding gene: 34497964
Following gene: 34497962
Centisome position: 56.85
GC content: 63.7
Gene sequence:
>540_bases ATGAGCGAGCGTTCCGATCCGGCAGGCGCGGCGCAGGGCGGCAAGTTCCACTGCGTTACCTTCATCCTGGGCGAGGACCT GTTCGGCATCCAGATCAACTTCATCCGCGAGATCATTGAGCTCGACGGCATCACCCACGTGCCGATGATGCCCAATTTCG TGCGCGGCATCATCAATCTGCGCGGCTCGGTGGTGCCGGTGATAGACCTGTCGATACGCTTCGGCAGGGGGCCGACCGAG CTGAAACCCTCCACCTGCGTGGCCATCCTGTCGCTGCCGGGGCTGGAGGGCGGCTACAACGATGTCGGCATCCTGCTGGA CGCGGTGTGCGAGGTGCTGGAGATTCCGGACAGCGACATCGATCCTTCGCCGACCTTCGGCGTCAGCATACGCGGCGACT TCATCCAGGGCATCGCCACCATCAACGAGCGCTTCGCCATCCTGCTCAATGTCCAGCAGGCGCTGTCGGTGACGGAGTTG AGCGCGATGGCGGAATCGGTGGCGCTGCAGCATTTCAGCGACGACGCCGAGGTGGCCTGA
Upstream 100 bases:
>100_bases GCCACAAGGCGGCCCCGCCGCCGTCCGCCCACGCCTTCGACGAAGATTTCGATGAAGAAGTGGACGACGGCAAGTTTTCC AAATACTGAGGAGCATGGCC
Downstream 100 bases:
>100_bases TGCGGGAGGGCGAACATGCACAGTTCTGACCCGGTGCTGAACGATGCGGAGTTCGCCCGATTCCGGCAGTTCATCCTCAG CGAGGCGGGCATAGACTTGC
Product: signal transduction chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSERSDPAGAAQGGKFHCVTFILGEDLFGIQINFIREIIELDGITHVPMMPNFVRGIINLRGSVVPVIDLSIRFGRGPTE LKPSTCVAILSLPGLEGGYNDVGILLDAVCEVLEIPDSDIDPSPTFGVSIRGDFIQGIATINERFAILLNVQQALSVTEL SAMAESVALQHFSDDAEVA
Sequences:
>Translated_179_residues MSERSDPAGAAQGGKFHCVTFILGEDLFGIQINFIREIIELDGITHVPMMPNFVRGIINLRGSVVPVIDLSIRFGRGPTE LKPSTCVAILSLPGLEGGYNDVGILLDAVCEVLEIPDSDIDPSPTFGVSIRGDFIQGIATINERFAILLNVQQALSVTEL SAMAESVALQHFSDDAEVA >Mature_178_residues SERSDPAGAAQGGKFHCVTFILGEDLFGIQINFIREIIELDGITHVPMMPNFVRGIINLRGSVVPVIDLSIRFGRGPTEL KPSTCVAILSLPGLEGGYNDVGILLDAVCEVLEIPDSDIDPSPTFGVSIRGDFIQGIATINERFAILLNVQQALSVTELS AMAESVALQHFSDDAEVA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=168, Percent_Identity=32.1428571428571, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 19167; Mature: 19036
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERSDPAGAAQGGKFHCVTFILGEDLFGIQINFIREIIELDGITHVPMMPNFVRGIINL CCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC RGSVVPVIDLSIRFGRGPTELKPSTCVAILSLPGLEGGYNDVGILLDAVCEVLEIPDSDI CCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC DPSPTFGVSIRGDFIQGIATINERFAILLNVQQALSVTELSAMAESVALQHFSDDAEVA CCCCCEEEEECHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SERSDPAGAAQGGKFHCVTFILGEDLFGIQINFIREIIELDGITHVPMMPNFVRGIINL CCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC RGSVVPVIDLSIRFGRGPTELKPSTCVAILSLPGLEGGYNDVGILLDAVCEVLEIPDSDI CCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC DPSPTFGVSIRGDFIQGIATINERFAILLNVQQALSVTELSAMAESVALQHFSDDAEVA CCCCCEEEEECHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]