| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497956
Identifier: 34497956
GI number: 34497956
Start: 2693360
End: 2693668
Strand: Reverse
Name: 34497956
Synonym: CV_2501
Alternate gene names: NA
Gene position: 2693668-2693360 (Counterclockwise)
Preceding gene: 34497957
Following gene: 34497955
Centisome position: 56.7
GC content: 58.9
Gene sequence:
>309_bases ATGAGCTTTTTCGACAAGCACGTATTCATCTGCTGCAACCAACGCGATGCCTGCCAGGATTGCTGCAACAACCACGGCTC CAGCGCGCTGCTGGGCTATATGAAGGACAAGGTCAAGGCGCTGGGCCTGGCTGGAGAAGGCAAGATCCGCGTCAACAAGG CAGGCTGCCTGGGGCGCTGCGACGACGGCCCGGTGATGGTGGTCTACCCGGAAGAGACCTGGTACACCTTCGTCGACAAG GATGACATCGATGAGATCGTCAGCGAACACATGGTCCACGGCCGCGTGGTGGAAAGGCTGAAGATCTGA
Upstream 100 bases:
>100_bases GGTGCGGCTGGCCTTCATCGGCCATTACGCCAAGTTCGACAACGCCGCCAGCGTCGGCGCGGCCGGCTGGGCGGACAGCG ACAGCTAAGCGAGACATTCC
Downstream 100 bases:
>100_bases TGCTGAAAGCGATGAACAAAGTCGGCGTCGCCGGTCCGGTCGGCGTGCTGGACACCATCTACGTGCCGGCCCAGGGCGAG GCCGCCGGCGTCGCCGTGAT
Product: ferredoxin 2fe-2s protein
Products: NA
Alternate protein names: 2FeCpFd [H]
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MSFFDKHVFICCNQRDACQDCCNNHGSSALLGYMKDKVKALGLAGEGKIRVNKAGCLGRCDDGPVMVVYPEETWYTFVDK DDIDEIVSEHMVHGRVVERLKI
Sequences:
>Translated_102_residues MSFFDKHVFICCNQRDACQDCCNNHGSSALLGYMKDKVKALGLAGEGKIRVNKAGCLGRCDDGPVMVVYPEETWYTFVDK DDIDEIVSEHMVHGRVVERLKI >Mature_101_residues SFFDKHVFICCNQRDACQDCCNNHGSSALLGYMKDKVKALGLAGEGKIRVNKAGCLGRCDDGPVMVVYPEETWYTFVDKD DIDEIVSEHMVHGRVVERLKI
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: NA
Molecular weight: Translated: 11471; Mature: 11340
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFDKHVFICCNQRDACQDCCNNHGSSALLGYMKDKVKALGLAGEGKIRVNKAGCLGRC CCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC DDGPVMVVYPEETWYTFVDKDDIDEIVSEHMVHGRVVERLKI CCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFFDKHVFICCNQRDACQDCCNNHGSSALLGYMKDKVKALGLAGEGKIRVNKAGCLGRC CCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC DDGPVMVVYPEETWYTFVDKDDIDEIVSEHMVHGRVVERLKI CCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3790505; 7916603; 8334159; 8392833 [H]