| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497955
Identifier: 34497955
GI number: 34497955
Start: 2692752
End: 2693360
Strand: Reverse
Name: 34497955
Synonym: CV_2500
Alternate gene names: NA
Gene position: 2693360-2692752 (Counterclockwise)
Preceding gene: 34497956
Following gene: 34497954
Centisome position: 56.69
GC content: 67.82
Gene sequence:
>609_bases ATGCTGAAAGCGATGAACAAAGTCGGCGTCGCCGGTCCGGTCGGCGTGCTGGACACCATCTACGTGCCGGCCCAGGGCGA GGCCGCCGGCGTCGCCGTGATCTGCCATCCCAACCCGCTGCAGGGCGGCACCCATACCAACAAGGTGGTGCAGACCGCCG CTAAGGCCTTGTCGCAGCTGGGCTACGCCTGTTACTGCCCGAACCTGCGCGGCGTCGGCGACAGCGAGGGCGAGCACGAT TACGGCAACGGCGAAGTGGACGACGCGATCGCGGTGGTCGAATACGCGAAATCTCAGCATCCGGGCCTGCCGCTGGCGCT GGCCGGCTTTTCCTTCGGCGGCTTCGTCGCCGCGCGCGCCCGCGCCCGCATCGAGGCCGACAAGCTGCTGCTGATGGGCG TGGCTGTCGGCAAGTATCCGATCCCGACGCCGGAGGTGCCTGCCGACACGCTGGTGATACACGGCGAAGAGGACGAGGTG ATCCCGTTGTCCGCCGTGATGGACTGGGCGCGGCCGCAGAACCTGCCGGTGCTGGTATTCCCGGGCGCCGGCCACTTCTT CCACGGCCGGCTGGTGCAGCTGGCGCAAATGATTCAGCGGTGCTGGTAA
Upstream 100 bases:
>100_bases CGGAAGAGACCTGGTACACCTTCGTCGACAAGGATGACATCGATGAGATCGTCAGCGAACACATGGTCCACGGCCGCGTG GTGGAAAGGCTGAAGATCTG
Downstream 100 bases:
>100_bases GCGCCGGAACAAGCAGACTCCGGTCTGCTTTTTTTGTATCGACAGAAAGAAAACAAGATGCAGAACATCATTGATTTCGT ATTGGAAATCGACAAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MLKAMNKVGVAGPVGVLDTIYVPAQGEAAGVAVICHPNPLQGGTHTNKVVQTAAKALSQLGYACYCPNLRGVGDSEGEHD YGNGEVDDAIAVVEYAKSQHPGLPLALAGFSFGGFVAARARARIEADKLLLMGVAVGKYPIPTPEVPADTLVIHGEEDEV IPLSAVMDWARPQNLPVLVFPGAGHFFHGRLVQLAQMIQRCW
Sequences:
>Translated_202_residues MLKAMNKVGVAGPVGVLDTIYVPAQGEAAGVAVICHPNPLQGGTHTNKVVQTAAKALSQLGYACYCPNLRGVGDSEGEHD YGNGEVDDAIAVVEYAKSQHPGLPLALAGFSFGGFVAARARARIEADKLLLMGVAVGKYPIPTPEVPADTLVIHGEEDEV IPLSAVMDWARPQNLPVLVFPGAGHFFHGRLVQLAQMIQRCW >Mature_202_residues MLKAMNKVGVAGPVGVLDTIYVPAQGEAAGVAVICHPNPLQGGTHTNKVVQTAAKALSQLGYACYCPNLRGVGDSEGEHD YGNGEVDDAIAVVEYAKSQHPGLPLALAGFSFGGFVAARARARIEADKLLLMGVAVGKYPIPTPEVPADTLVIHGEEDEV IPLSAVMDWARPQNLPVLVFPGAGHFFHGRLVQLAQMIQRCW
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 21318; Mature: 21318
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAMNKVGVAGPVGVLDTIYVPAQGEAAGVAVICHPNPLQGGTHTNKVVQTAAKALSQL CCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC GYACYCPNLRGVGDSEGEHDYGNGEVDDAIAVVEYAKSQHPGLPLALAGFSFGGFVAARA CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH RARIEADKLLLMGVAVGKYPIPTPEVPADTLVIHGEEDEVIPLSAVMDWARPQNLPVLVF HHHHCHHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCEEEE PGAGHFFHGRLVQLAQMIQRCW CCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKAMNKVGVAGPVGVLDTIYVPAQGEAAGVAVICHPNPLQGGTHTNKVVQTAAKALSQL CCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC GYACYCPNLRGVGDSEGEHDYGNGEVDDAIAVVEYAKSQHPGLPLALAGFSFGGFVAARA CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH RARIEADKLLLMGVAVGKYPIPTPEVPADTLVIHGEEDEVIPLSAVMDWARPQNLPVLVF HHHHCHHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCEEEE PGAGHFFHGRLVQLAQMIQRCW CCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]