| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is hik2 [H]
Identifier: 34497953
GI number: 34497953
Start: 2688875
End: 2691091
Strand: Reverse
Name: hik2 [H]
Synonym: CV_2498
Alternate gene names: 34497953
Gene position: 2691091-2688875 (Counterclockwise)
Preceding gene: 34497954
Following gene: 34497952
Centisome position: 56.64
GC content: 64.55
Gene sequence:
>2217_bases TTGCGCGAGGCCAAGCAGATGGCCGAGCAGGCCACCCGCGCCAAGTCGCTGTTCCTGGCCAACATGAGCCACGAGATACG CACGCCAATGAACGCCATCATCGGCATGTCTTACCTGGCGCTGCGCACCGATCTCGACGACCAGCAGCGCAACTACATCG GCAAGATCCACAATGCAGGCACTTCGCTGCTGGGCATCATCAACGACATCCTCGATTTTTCCAAGGTGGAGGCCGGCAAG CTGGAGCTGGAGGCACAGCCTTTCTGGCTGGACGATGTGCTGGACGGCGTGTCGGCGCTGGTTGCGCAGAAGGCGGCGGA CAAGGGGCTGGAGCTGTTGTTCGAAACCGCGGGCGACGTGCCGCAGGGGCTGGTCGGCGATGCGCTGAGGCTGGGGCAGG TGCTGACCAATCTGGCCGGCAACGCGATCAAGTTCACAGAGACGGGGCAGGTGTCCATCATCATCGGCCAGGTCGAACGC ATAGGCGACAAGGTCCAGCTGAAGTTCTGCGTCCACGATACCGGGATAGGCATGAGCGAGGAGCAGCAAAGCCGGCTGTT CCAGGCCTTCAGCCAGGCGGATGGTTCGACGACGCGCCGCTTTGGCGGCACCGGCCTGGGCCTGACCATCGCGAAAAGGC TGGTGGAGCTGATGGGCGGCAGCATGTTGGTGGAATCGGCTCCAGGCTGGGGCAGCTCTTTCATCTTCAGCTGCTGGCTG GGCGTGTCGGCCGAAACGGATTCGCGCCGGCAGTCGCTGCCCAAGGAAATTCGCGGCTTGCGCGTGCTGGTGGTGGACGA CAACCAGTCGGCCGTCGACGTCCTGTGCGCGCAACTGAAACAGCTGGGTTTCGAGGTGCAGGGATGCTTGAACGGCCACG AGGCCTTGTCGAAAGTGCGGCAGGATTGCCTGCAAAAGCCGTTCGACGTCGCCTTCGTCGACTGGATGATGCCGGAAATG GACGGCCTGGAAGCGGTGCGCAGAATGCGGCAGGTCAGCCGCAAGATGCGCATCGTGATGGTGACGGCCTTCGGGCGCGA CGAAATCCGGGTCAAGGCCCGCGCCGCCGGCTGCGATGCTTTCATGGTCAAGCCAGTCAATCTGTCCCAACTGTACGATG TGCTGCTGGAGGTGTTCGGTTTCGGGCGCAGCGGCGGCTTGTCGCTGTTCGATGAGACGGACCAGCTTCCCCGCTTCGAT GGCGCGCACCTGCTGCTGGTGGAGGACAATCGCATCAATCAGCAGATCGCGATCGAGCTGCTGGAAGGCACGGGCGCGAC CATTACGGTGGCCGCGAACGGGCAGGCGGCGCTGGACAAGCTGCTGGCTTATGGTCCCAAGGCTTTCGATGCGGTGCTGA TGGACGTGCAGATGCCGGTGATGGACGGGATAGAGGCCACCGGACGCATACGTTCCCAGCCGGGATTCATCGATCTGCCT GTCATCGCGATGACGGCGGACGCGCTGGTGGAGGAGCGGGAGCGCTGTCTGGCGGCGGGCATGGTGGACCATATCGCGAA GCCCATCGACCCGCATATTCTATTCTCCACCCTGGCGCGCTGGGTGCGGCGAAGCGGGGCGCCGCAGGGGCGCGAAGCCG AAACTGCCGCCGACCAGACGCCGCTGCCGCAGATCGACGGCTTGGACCAGCTGGCGGGTCTGCGCCGCGTAGCCGGCAAT CGACAGCTCTACCTGCATCTGCTCAGACAGTTCGTCGATGAGGAGGCCGGCGCGGCCACCCGTTTGGGCCTTGCTTTGGG CGAGCGTGACTTCCAGACGGCGGAGCGCATCGCGCACACGCTGAAGGGCGCGGCCGGGAGCATAGGTTTCGTCGATCTGC AAAGCGCGGCGATGCGATTGGAAATGGCGCTCCGGGCGCGCGAAAGCTGGCAAGATTTGCTGGTGGAGCTGGAAATGGAG TTGGGGCAAGTGGTGGGCGCCCTGCGGGCCGGTTTGGCGGAACTGGGGCAGCCCGCGTCCGGCGCCAGGCCGGATGACGC GCTGCTCGAACGCCTGGCCGCGTTGCTGGCGGTTGGGGACGGCGACGCGCTGGGATATTTTCTTGAGCATGCGCCGCGCA TCCGGGCCTGCTTTCCGGAGGGAGCATGCGCTGATTTCGAGCAAGCGCTGAACCGTTTCGATTTCGTTTCCGCGTTGGGC GCGCTGCGCGAGCTGGCGAGAGCTTGCGGCAAAAAGCTGCCGGAGGACACGAGATGA
Upstream 100 bases:
>100_bases CGGTCGTATTTACGGCTTGATGGCTGCCAGCTTCGTGTTGATGGTGCTGCTGCTGGAGTATGGCTTGCTGTACGCGCGGC TGGTCGAGAATTCCGCGCAA
Downstream 100 bases:
>100_bases GCGATGCGAACGCAGCCGGGCGTCAGACCGTGCTGCTGGTGGACGACAGCCCAGAGAGCCTGACCCAGATGTACGGTTTG CTGAAGGCGGACTATCGGAC
Product: hybrid sensory kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MREAKQMAEQATRAKSLFLANMSHEIRTPMNAIIGMSYLALRTDLDDQQRNYIGKIHNAGTSLLGIINDILDFSKVEAGK LELEAQPFWLDDVLDGVSALVAQKAADKGLELLFETAGDVPQGLVGDALRLGQVLTNLAGNAIKFTETGQVSIIIGQVER IGDKVQLKFCVHDTGIGMSEEQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSMLVESAPGWGSSFIFSCWL GVSAETDSRRQSLPKEIRGLRVLVVDDNQSAVDVLCAQLKQLGFEVQGCLNGHEALSKVRQDCLQKPFDVAFVDWMMPEM DGLEAVRRMRQVSRKMRIVMVTAFGRDEIRVKARAAGCDAFMVKPVNLSQLYDVLLEVFGFGRSGGLSLFDETDQLPRFD GAHLLLVEDNRINQQIAIELLEGTGATITVAANGQAALDKLLAYGPKAFDAVLMDVQMPVMDGIEATGRIRSQPGFIDLP VIAMTADALVEERERCLAAGMVDHIAKPIDPHILFSTLARWVRRSGAPQGREAETAADQTPLPQIDGLDQLAGLRRVAGN RQLYLHLLRQFVDEEAGAATRLGLALGERDFQTAERIAHTLKGAAGSIGFVDLQSAAMRLEMALRARESWQDLLVELEME LGQVVGALRAGLAELGQPASGARPDDALLERLAALLAVGDGDALGYFLEHAPRIRACFPEGACADFEQALNRFDFVSALG ALRELARACGKKLPEDTR
Sequences:
>Translated_738_residues MREAKQMAEQATRAKSLFLANMSHEIRTPMNAIIGMSYLALRTDLDDQQRNYIGKIHNAGTSLLGIINDILDFSKVEAGK LELEAQPFWLDDVLDGVSALVAQKAADKGLELLFETAGDVPQGLVGDALRLGQVLTNLAGNAIKFTETGQVSIIIGQVER IGDKVQLKFCVHDTGIGMSEEQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSMLVESAPGWGSSFIFSCWL GVSAETDSRRQSLPKEIRGLRVLVVDDNQSAVDVLCAQLKQLGFEVQGCLNGHEALSKVRQDCLQKPFDVAFVDWMMPEM DGLEAVRRMRQVSRKMRIVMVTAFGRDEIRVKARAAGCDAFMVKPVNLSQLYDVLLEVFGFGRSGGLSLFDETDQLPRFD GAHLLLVEDNRINQQIAIELLEGTGATITVAANGQAALDKLLAYGPKAFDAVLMDVQMPVMDGIEATGRIRSQPGFIDLP VIAMTADALVEERERCLAAGMVDHIAKPIDPHILFSTLARWVRRSGAPQGREAETAADQTPLPQIDGLDQLAGLRRVAGN RQLYLHLLRQFVDEEAGAATRLGLALGERDFQTAERIAHTLKGAAGSIGFVDLQSAAMRLEMALRARESWQDLLVELEME LGQVVGALRAGLAELGQPASGARPDDALLERLAALLAVGDGDALGYFLEHAPRIRACFPEGACADFEQALNRFDFVSALG ALRELARACGKKLPEDTR >Mature_738_residues MREAKQMAEQATRAKSLFLANMSHEIRTPMNAIIGMSYLALRTDLDDQQRNYIGKIHNAGTSLLGIINDILDFSKVEAGK LELEAQPFWLDDVLDGVSALVAQKAADKGLELLFETAGDVPQGLVGDALRLGQVLTNLAGNAIKFTETGQVSIIIGQVER IGDKVQLKFCVHDTGIGMSEEQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSMLVESAPGWGSSFIFSCWL GVSAETDSRRQSLPKEIRGLRVLVVDDNQSAVDVLCAQLKQLGFEVQGCLNGHEALSKVRQDCLQKPFDVAFVDWMMPEM DGLEAVRRMRQVSRKMRIVMVTAFGRDEIRVKARAAGCDAFMVKPVNLSQLYDVLLEVFGFGRSGGLSLFDETDQLPRFD GAHLLLVEDNRINQQIAIELLEGTGATITVAANGQAALDKLLAYGPKAFDAVLMDVQMPVMDGIEATGRIRSQPGFIDLP VIAMTADALVEERERCLAAGMVDHIAKPIDPHILFSTLARWVRRSGAPQGREAETAADQTPLPQIDGLDQLAGLRRVAGN RQLYLHLLRQFVDEEAGAATRLGLALGERDFQTAERIAHTLKGAAGSIGFVDLQSAAMRLEMALRARESWQDLLVELEME LGQVVGALRAGLAELGQPASGARPDDALLERLAALLAVGDGDALGYFLEHAPRIRACFPEGACADFEQALNRFDFVSALG ALRELARACGKKLPEDTR
Specific function: Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. Phosphorylates UvrY, probably via a four-step phosphorelay [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=623, Percent_Identity=34.991974317817, Blast_Score=325, Evalue=5e-90, Organism=Escherichia coli, GI145693157, Length=530, Percent_Identity=33.5849056603774, Blast_Score=221, Evalue=2e-58, Organism=Escherichia coli, GI87081816, Length=412, Percent_Identity=32.2815533980583, Blast_Score=185, Evalue=1e-47, Organism=Escherichia coli, GI48994928, Length=369, Percent_Identity=32.2493224932249, Blast_Score=184, Evalue=1e-47, Organism=Escherichia coli, GI1788713, Length=387, Percent_Identity=33.8501291989664, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=27.8761061946903, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=29.8245614035088, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=28.2157676348548, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=30.6666666666667, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1786912, Length=236, Percent_Identity=26.271186440678, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790346, Length=238, Percent_Identity=26.890756302521, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788549, Length=236, Percent_Identity=25, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1787894, Length=257, Percent_Identity=24.9027237354086, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=382, Percent_Identity=26.7015706806283, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6322000, Length=153, Percent_Identity=32.6797385620915, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR019247 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF09984 DUF2222; PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 80240; Mature: 80240
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREAKQMAEQATRAKSLFLANMSHEIRTPMNAIIGMSYLALRTDLDDQQRNYIGKIHNAG CCHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TSLLGIINDILDFSKVEAGKLELEAQPFWLDDVLDGVSALVAQKAADKGLELLFETAGDV HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQGLVGDALRLGQVLTNLAGNAIKFTETGQVSIIIGQVERIGDKVQLKFCVHDTGIGMSE CCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHCCCEEEEEEEEEECCCCCCH EQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSMLVESAPGWGSSFIFSCWL HHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH GVSAETDSRRQSLPKEIRGLRVLVVDDNQSAVDVLCAQLKQLGFEVQGCLNGHEALSKVR CCCCCCCHHHHHCHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH QDCLQKPFDVAFVDWMMPEMDGLEAVRRMRQVSRKMRIVMVTAFGRDEIRVKARAAGCDA HHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEECCCCCEEEEEECCCCCE FMVKPVNLSQLYDVLLEVFGFGRSGGLSLFDETDQLPRFDGAHLLLVEDNRINQQIAIEL EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH LEGTGATITVAANGQAALDKLLAYGPKAFDAVLMDVQMPVMDGIEATGRIRSQPGFIDLP HCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECH VIAMTADALVEERERCLAAGMVDHIAKPIDPHILFSTLARWVRRSGAPQGREAETAADQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC PLPQIDGLDQLAGLRRVAGNRQLYLHLLRQFVDEEAGAATRLGLALGERDFQTAERIAHT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH LKGAAGSIGFVDLQSAAMRLEMALRARESWQDLLVELEMELGQVVGALRAGLAELGQPAS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARPDDALLERLAALLAVGDGDALGYFLEHAPRIRACFPEGACADFEQALNRFDFVSALG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH ALRELARACGKKLPEDTR HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MREAKQMAEQATRAKSLFLANMSHEIRTPMNAIIGMSYLALRTDLDDQQRNYIGKIHNAG CCHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC TSLLGIINDILDFSKVEAGKLELEAQPFWLDDVLDGVSALVAQKAADKGLELLFETAGDV HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PQGLVGDALRLGQVLTNLAGNAIKFTETGQVSIIIGQVERIGDKVQLKFCVHDTGIGMSE CCHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECHHHCCCEEEEEEEEEECCCCCCH EQQSRLFQAFSQADGSTTRRFGGTGLGLTIAKRLVELMGGSMLVESAPGWGSSFIFSCWL HHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH GVSAETDSRRQSLPKEIRGLRVLVVDDNQSAVDVLCAQLKQLGFEVQGCLNGHEALSKVR CCCCCCCHHHHHCHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH QDCLQKPFDVAFVDWMMPEMDGLEAVRRMRQVSRKMRIVMVTAFGRDEIRVKARAAGCDA HHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEECCCCCEEEEEECCCCCE FMVKPVNLSQLYDVLLEVFGFGRSGGLSLFDETDQLPRFDGAHLLLVEDNRINQQIAIEL EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH LEGTGATITVAANGQAALDKLLAYGPKAFDAVLMDVQMPVMDGIEATGRIRSQPGFIDLP HCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECH VIAMTADALVEERERCLAAGMVDHIAKPIDPHILFSTLARWVRRSGAPQGREAETAADQT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCC PLPQIDGLDQLAGLRRVAGNRQLYLHLLRQFVDEEAGAATRLGLALGERDFQTAERIAHT CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH LKGAAGSIGFVDLQSAAMRLEMALRARESWQDLLVELEMELGQVVGALRAGLAELGQPAS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GARPDDALLERLAALLAVGDGDALGYFLEHAPRIRACFPEGACADFEQALNRFDFVSALG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH ALRELARACGKKLPEDTR HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]