Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yfbR [C]

Identifier: 34497954

GI number: 34497954

Start: 2692119

End: 2692694

Strand: Reverse

Name: yfbR [C]

Synonym: CV_2499

Alternate gene names: 34497954

Gene position: 2692694-2692119 (Counterclockwise)

Preceding gene: 34497955

Following gene: 34497953

Centisome position: 56.68

GC content: 66.15

Gene sequence:

>576_bases
ATGCAGAACATCATTGATTTCGTATTGGAAATCGACAAGCTCAAGCAGGTGACGCGCAAGACGCGCGTGCTGAACAGCGA
CCGTTACGAGAACTCCGCCGAGCACAGCTGGCAGATCGCGCTGCTGGCGTCCTCGCTGGCGCCTTACGCGGCGGAGCCGG
TCAACATGGATCGCGTGGTGGCGATGCTGCTGGTGCACGACATCGGCGAGATCGAGACAGGCGACACCATCGTCTATGCC
GAAGGCGGCTGGGAGGAGCGCAAGGCGCAGGAGCTGGCCTGCGTGAGCCGCATCTTCGGCATGCTGCCCGAGGCGCAGGG
AAGCCGTTTCCTGGCGCTGTGGAACGAGTTCGAGGCCGGCGAGACCGCCGAGGCGCGTTTTGCCCACGCGGCGGACCGCG
CGATGCCGGTGCTGCTGAATCTGGCCAACAGCGGGCAGAGCTGGCGCGAGAACGGCATTCGCCACCAGCAGGTGGTGGAT
CGCATCGGTCCGCCGGTACGCGCCGGCTGTCCTGCGCTGTGGGATTACCTGGAAGGCCGGCTGGAGCAGGCGAAGGCGCA
CGGCTGGCTGGGCTGA

Upstream 100 bases:

>100_bases
CCGGCTGGTGCAGCTGGCGCAAATGATTCAGCGGTGCTGGTAAGCGCCGGAACAAGCAGACTCCGGTCTGCTTTTTTTGT
ATCGACAGAAAGAAAACAAG

Downstream 100 bases:

>100_bases
GCGAGCGGCGATATTGATGGTCTGAATCGGGCGGACGGCATATGTCGCCGCCATCGCTGTGCTATACCTCAGGTGCCGGG
TGCGGAATCCGGCGCGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: HD Domain-Containing Protein; HD Domain Protein; Metal-Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Hydrolase; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; Hydrolases Of HD Superfamily; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; Xin-Antitoxin System Toxin Component PIN Family; HD Superfamily Metal-Dependent Phosphohydrolase

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MQNIIDFVLEIDKLKQVTRKTRVLNSDRYENSAEHSWQIALLASSLAPYAAEPVNMDRVVAMLLVHDIGEIETGDTIVYA
EGGWEERKAQELACVSRIFGMLPEAQGSRFLALWNEFEAGETAEARFAHAADRAMPVLLNLANSGQSWRENGIRHQQVVD
RIGPPVRAGCPALWDYLEGRLEQAKAHGWLG

Sequences:

>Translated_191_residues
MQNIIDFVLEIDKLKQVTRKTRVLNSDRYENSAEHSWQIALLASSLAPYAAEPVNMDRVVAMLLVHDIGEIETGDTIVYA
EGGWEERKAQELACVSRIFGMLPEAQGSRFLALWNEFEAGETAEARFAHAADRAMPVLLNLANSGQSWRENGIRHQQVVD
RIGPPVRAGCPALWDYLEGRLEQAKAHGWLG
>Mature_191_residues
MQNIIDFVLEIDKLKQVTRKTRVLNSDRYENSAEHSWQIALLASSLAPYAAEPVNMDRVVAMLLVHDIGEIETGDTIVYA
EGGWEERKAQELACVSRIFGMLPEAQGSRFLALWNEFEAGETAEARFAHAADRAMPVLLNLANSGQSWRENGIRHQQVVD
RIGPPVRAGCPALWDYLEGRLEQAKAHGWLG

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21369; Mature: 21369

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIIDFVLEIDKLKQVTRKTRVLNSDRYENSAEHSWQIALLASSLAPYAAEPVNMDRVV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
AMLLVHDIGEIETGDTIVYAEGGWEERKAQELACVSRIFGMLPEAQGSRFLALWNEFEAG
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCC
ETAEARFAHAADRAMPVLLNLANSGQSWRENGIRHQQVVDRIGPPVRAGCPALWDYLEGR
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
LEQAKAHGWLG
HHHHHHCCCCC
>Mature Secondary Structure
MQNIIDFVLEIDKLKQVTRKTRVLNSDRYENSAEHSWQIALLASSLAPYAAEPVNMDRVV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
AMLLVHDIGEIETGDTIVYAEGGWEERKAQELACVSRIFGMLPEAQGSRFLALWNEFEAG
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCC
ETAEARFAHAADRAMPVLLNLANSGQSWRENGIRHQQVVDRIGPPVRAGCPALWDYLEGR
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHH
LEQAKAHGWLG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA