| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497906
Identifier: 34497906
GI number: 34497906
Start: 2636488
End: 2637231
Strand: Reverse
Name: 34497906
Synonym: CV_2451
Alternate gene names: NA
Gene position: 2637231-2636488 (Counterclockwise)
Preceding gene: 34497908
Following gene: 34497898
Centisome position: 55.51
GC content: 67.07
Gene sequence:
>744_bases ATGCGGCCTCCCGCAGGCGAAGTCCGGCCAGACCGTGGACCAGCAGCAGCGCCAGCAGGCACAGCGCCCAGCCGTCGCGG ATGCCGAACAGGCCTGCGCACAGGGCCGGCATCGCCAGCGTCAGCGCCAGCCAGCCCATCCAGCCCCAACGCCGCTGATC CGACATGCCGCCTATGGCGATGGTGCCGGCTACCAGGCAGGCGAATACGCTCCATTTGCCGACGGCGTCCCAGCCAGCCA CCCGGTCCACGTAATAGATCACCATGCCGAACAGCAAGATCCCGCCGGTGGCGATGTAGGCGGCGGGCAGGCGCGGCGCG CGCCCTTCCGCGCCGCCGAAGCGGCGCCGGGTCCAGGCCAGCAGCCCCTGGTTGCTGGCCCAGAACGGATTGTAGCCGGG CGAGGCGCCGCTCACGCCGTAGCGCAGCGGGATGTCGTCGCGCTCGGCCTGATAGCTGCCGAACAGCTTGTCCCAGATCA GGAAGGTGCCGCCGAAATTCTTGTTCAGGTACGCCGGATGCATCGCATGGTGGACGCGATGGTTGGACGGCGTCACCAGC ACCCGGTCCAGCCAGCCGCTCTTGCCGACGAAGGCATTATGGTTGTACAGCTGCACCGCGTAATGAAAAGACGATGCGGC GACGAACATCTCCAGCGGCAGGCCCAGCACGGCCAGCGGCGCGACGAAAAGAAACGAGGTCAGCGAGGAATACCAGGAAT TGCGTATGCCCAGCGACAGGCTGA
Upstream 100 bases:
>100_bases GAAGCGATGGTCGCCGCGCTCTGCCAGATAGTCTTGGGCGGCGCGTTGCAGGTCGACCCGGAACGGCAGCTGCGCCGACG AGCGGAATCTCAGTTTGCCC
Downstream 100 bases:
>100_bases AATGCTCGCCCTGGTGGTGCACCACGTGCACCGCCCAGAAGATGCGCCAGGTATGGTGGGCCCGGTGCATGCAGTAAAAG CTCAGGTCCCAGGCGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWRWCRLPGRRIRSICRRRPSQP PGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRPAAPGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRS GRCRRNSCSGTPDASHGGRDGWTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKETRSARNTRN CVCPATG
Sequences:
>Translated_247_residues MRPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWRWCRLPGRRIRSICRRRPSQP PGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRPAAPGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRS GRCRRNSCSGTPDASHGGRDGWTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKETRSARNTRN CVCPATG >Mature_247_residues MRPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWRWCRLPGRRIRSICRRRPSQP PGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRPAAPGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRS GRCRRNSCSGTPDASHGGRDGWTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKETRSARNTRN CVCPATG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26809; Mature: 26809
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH WCRLPGRRIRSICRRRPSQPPGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRP HHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC AAPGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRSGRCRRNSCSGTPDASHGGRD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GWTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKETRSARNTRN CCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC CVCPATG CCCCCCC >Mature Secondary Structure MRPPAGEVRPDRGPAAAPAGTAPSRRGCRTGLRTGPASPASAPASPSSPNAADPTCRLWR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH WCRLPGRRIRSICRRRPSQPPGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRP HHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC AAPGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRSGRCRRNSCSGTPDASHGGRD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GWTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKETRSARNTRN CCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC CVCPATG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA