| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497898
Identifier: 34497898
GI number: 34497898
Start: 2628514
End: 2629683
Strand: Reverse
Name: 34497898
Synonym: CV_2443
Alternate gene names: NA
Gene position: 2629683-2628514 (Counterclockwise)
Preceding gene: 34497906
Following gene: 34497897
Centisome position: 55.35
GC content: 58.97
Gene sequence:
>1170_bases ATGAGCCGTGGTGTATTGGGGTTTAATGGGGAGCGCCTTGACCCGGCACGCGGATTCGCTCTCCTCGGAAAGGGTTGCCG AGCCTACAGTCCGGCATTGATGCGTTTTCATTGCCCGGACAGTCTGAGTCCATTTGGCGCCGGCGGGATCAATTCCTACG CCTATTGCAGCGGAGACCCGGTCAATCGGGCCGACCCCTCTGGGCATCTGAGCTGGCAAGCCTGGGCGGGGATTGGCTTG GCCGCGGCAGGTTTGGCGCTGGCGGCCTATACCGCAGGCAGCTCGATTGCCGCCGCCGGCGGCATGATCTCTGCGCTGGA AAGCGCCTCTGCCGCATCGTTGGCGATAGGCGGAGCCGCCGTGGTGGCGGATGCGGCGGCAATCGCGAGCGAGACGGTTG GCGCGAGCCATCCGACAGCGTCATCTGTCTTGGGATGGGTGTCGCTATCCGCGGGGATGCTGTCACTGGGTGCGGGACTG GTCTCCACAGGACACCGAGCCCTCAGGCAGTCAGGGAAAGCCAGCGATTCCATGGTGATGGATCTGGATAGCGAATTCAG GTTCGTTGCCGCGCTTGGCCGTACGGCGAGAAGAGGGGCGAATCCCGACTCGATGATGTCTGTAGTATTCGAAGATCATT TTCAGAATGGATTGCGGCTGAACATCTGGGCGCATGGGAGGAATCCCGATCTCATCTTCATAAATGGACGAACATTCAAT GCCCGCACACTGCTCGAACTTCTCGACGCCGTAGGCGTGGATCTGGCAGATTACGATGCTATCAGGTTTATAACCTGCAA CTCGGTAAATCTGGCGCGGGCATTTGTGAGAAATTTGCCAGTCGCCGGAGATTTGCCGATAAATTCAATGCAAACCGTTA CTGGTTTTCGAGGAGAGGTGACCGTTCAGGGGCATGCCGTTGCTGCGCTCAGGCGGATATCCGCGGAGGTGCGTAATTTT CCAGACGCCGAGGCGCGGATACGTTTTGCTCAAGCCGTGGAGCGATACCCTGACCAGGCGATCATCGAGGGCGTCAATAT TTTCGCGGATCTGGAGTTTTTCCGTATCGCGCATGGCAATCCTGTTTCATTCAGGCGGTCGCCAGCCCAGAGAGAGATCA TAGAGCAGACGGAGGGATATCCCCCGCCGGCTTGGGGTGGACTGGCCTAG
Upstream 100 bases:
>100_bases TCGGCGGAAATATCTGATTTTACTCATGACTCGCAGCCGGGTCTGGCGGGGTCATGAATAGTGCGATCGCTGATTGCGGT TTTGCTTGCAGGGGGAAATC
Downstream 100 bases:
>100_bases TTTTCCCGGCAAGACCGGCGCCATCTTTTCAAGCCAGGCTTTAGATGCGGCAACCCTGGCGGTTCATCTTGTCCTGCACG TCGCGCAGCTTGGTGAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSRGVLGFNGERLDPARGFALLGKGCRAYSPALMRFHCPDSLSPFGAGGINSYAYCSGDPVNRADPSGHLSWQAWAGIGL AAAGLALAAYTAGSSIAAAGGMISALESASAASLAIGGAAVVADAAAIASETVGASHPTASSVLGWVSLSAGMLSLGAGL VSTGHRALRQSGKASDSMVMDLDSEFRFVAALGRTARRGANPDSMMSVVFEDHFQNGLRLNIWAHGRNPDLIFINGRTFN ARTLLELLDAVGVDLADYDAIRFITCNSVNLARAFVRNLPVAGDLPINSMQTVTGFRGEVTVQGHAVAALRRISAEVRNF PDAEARIRFAQAVERYPDQAIIEGVNIFADLEFFRIAHGNPVSFRRSPAQREIIEQTEGYPPPAWGGLA
Sequences:
>Translated_389_residues MSRGVLGFNGERLDPARGFALLGKGCRAYSPALMRFHCPDSLSPFGAGGINSYAYCSGDPVNRADPSGHLSWQAWAGIGL AAAGLALAAYTAGSSIAAAGGMISALESASAASLAIGGAAVVADAAAIASETVGASHPTASSVLGWVSLSAGMLSLGAGL VSTGHRALRQSGKASDSMVMDLDSEFRFVAALGRTARRGANPDSMMSVVFEDHFQNGLRLNIWAHGRNPDLIFINGRTFN ARTLLELLDAVGVDLADYDAIRFITCNSVNLARAFVRNLPVAGDLPINSMQTVTGFRGEVTVQGHAVAALRRISAEVRNF PDAEARIRFAQAVERYPDQAIIEGVNIFADLEFFRIAHGNPVSFRRSPAQREIIEQTEGYPPPAWGGLA >Mature_388_residues SRGVLGFNGERLDPARGFALLGKGCRAYSPALMRFHCPDSLSPFGAGGINSYAYCSGDPVNRADPSGHLSWQAWAGIGLA AAGLALAAYTAGSSIAAAGGMISALESASAASLAIGGAAVVADAAAIASETVGASHPTASSVLGWVSLSAGMLSLGAGLV STGHRALRQSGKASDSMVMDLDSEFRFVAALGRTARRGANPDSMMSVVFEDHFQNGLRLNIWAHGRNPDLIFINGRTFNA RTLLELLDAVGVDLADYDAIRFITCNSVNLARAFVRNLPVAGDLPINSMQTVTGFRGEVTVQGHAVAALRRISAEVRNFP DAEARIRFAQAVERYPDQAIIEGVNIFADLEFFRIAHGNPVSFRRSPAQREIIEQTEGYPPPAWGGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40864; Mature: 40732
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGVLGFNGERLDPARGFALLGKGCRAYSPALMRFHCPDSLSPFGAGGINSYAYCSGDP CCCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC VNRADPSGHLSWQAWAGIGLAAAGLALAAYTAGSSIAAAGGMISALESASAASLAIGGAA CCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHCCCHHHEEECCHH VVADAAAIASETVGASHPTASSVLGWVSLSAGMLSLGAGLVSTGHRALRQSGKASDSMVM HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEE DLDSEFRFVAALGRTARRGANPDSMMSVVFEDHFQNGLRLNIWAHGRNPDLIFINGRTFN ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCC ARTLLELLDAVGVDLADYDAIRFITCNSVNLARAFVRNLPVAGDLPINSMQTVTGFRGEV HHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEE TVQGHAVAALRRISAEVRNFPDAEARIRFAQAVERYPDQAIIEGVNIFADLEFFRIAHGN EECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEECCEEEEEECCC PVSFRRSPAQREIIEQTEGYPPPAWGGLA CCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRGVLGFNGERLDPARGFALLGKGCRAYSPALMRFHCPDSLSPFGAGGINSYAYCSGDP CCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCC VNRADPSGHLSWQAWAGIGLAAAGLALAAYTAGSSIAAAGGMISALESASAASLAIGGAA CCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHCCCHHHEEECCHH VVADAAAIASETVGASHPTASSVLGWVSLSAGMLSLGAGLVSTGHRALRQSGKASDSMVM HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEE DLDSEFRFVAALGRTARRGANPDSMMSVVFEDHFQNGLRLNIWAHGRNPDLIFINGRTFN ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCC ARTLLELLDAVGVDLADYDAIRFITCNSVNLARAFVRNLPVAGDLPINSMQTVTGFRGEV HHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEE TVQGHAVAALRRISAEVRNFPDAEARIRFAQAVERYPDQAIIEGVNIFADLEFFRIAHGN EECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHEECCEEEEEECCC PVSFRRSPAQREIIEQTEGYPPPAWGGLA CCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA