| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863498
Identifier: 33863498
GI number: 33863498
Start: 1316671
End: 1317708
Strand: Reverse
Name: 33863498
Synonym: PMT1230
Alternate gene names: NA
Gene position: 1317708-1316671 (Counterclockwise)
Preceding gene: 33863499
Following gene: 33863497
Centisome position: 54.66
GC content: 47.21
Gene sequence:
>1038_bases ATGTTTGGTCTGATCGGTCATTCCACCAGTTTTGAAGATGCCAGGAAGACGGCACTTCAGATTGGCTATGACCATCTAGA TGGAGACCTGGATGTTTGGTGCAGTGCTCCTCCGCAGTTTTTGGAACAGATAGAGGTAGAAAGCCTTACAGGAAAGAAAA TAGAAGGCGCTTATATCGATTCATGTTTTGTGCCAGAAATGTTGAGTCGGTTCAAAACTGCCCGTCGCAAAGTTCTCAAT GCCATGGAAATGGCCCAGAAGAGAGGCATTCAGATAAGTGCCCTAGGCGGATTTACCTCAATTATTTTTGAGAACTTCAA TCTTCTTAAGCATCAACATGTACGAAACACCACGCTTGAATGGGAGCGATTCACAACCGGCAACACTCATACGGCTTGGG TTATTTGCCGTCAGCTTGAGAACAATGCCCCACTTTTGGGCATTGATTTAAGCAAGGCGCGTGTAGCGGTAGTTGGTGCA ACTGGCGATATAGGTAGTGCTGTTTGCCGTTGGCTTTCCGCTCGAACTGGTGTCGCTGAACTTCTTTTGGTGGCTAGACA GCAACAACCTCTTATAGATCTTCAAACTGAATTGGCTGGCGGCAGAATATTGAGTCTTGAAGAGGCCTTGCCTGAAGCTG ATGTTGTGGTTTGGGTTGCCAGCATGCCTAGAACCCTGGAAATCGATATGGAGAGTTTGCGCAAGCCTTGCTTGATGATT GATGGGGGCTATCCGAAGAACCTAGATGCAAAGTTTGCTGGTAGTGGGGTGCATGTTCTCAAAGGAGGAATCGTTGAGTT CTGCAATGACATCAGCTGGGATGTTGGCTGGATTGCAGAGATGGATAAGCCTGCGAGGCAAATGTTTGCCTGTTTTGCAG AAGCAATGCTGTTGGAGTTTGAGAATTGCCACACAAACTTCAGTTGGGGGCGTAACCAGATCACCCTTGAGAAAATGGAT TTTATCGGCATGGCGTCTTTGCGTCATGGTTTTTCAAGCCTCAATCTCAATCACCAACTTCAGGCTGCTGCAGCCTGA
Upstream 100 bases:
>100_bases AACACTGGACCGTAAAGACCAGCATTAATGGGATTATGGTTGACTTGGACCTCTTCAGGGCTTATAGGGTGGGCTCAGTT TTTTCGTATGTCAGCACTAC
Downstream 100 bases:
>100_bases ACCTTGTTTCCGGATCTTTTCTTGTCATGGCTCGTCGTTATCTGTTTGAGTTCGAAAAGCCATTGGTAGAACTAGAGCAG CAGATTGAGCAGATCCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydrogenase; Dehydrogenase-Like Protein; Acyl-ACP Reductase; Aminotransferase Class-III; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MFGLIGHSTSFEDARKTALQIGYDHLDGDLDVWCSAPPQFLEQIEVESLTGKKIEGAYIDSCFVPEMLSRFKTARRKVLN AMEMAQKRGIQISALGGFTSIIFENFNLLKHQHVRNTTLEWERFTTGNTHTAWVICRQLENNAPLLGIDLSKARVAVVGA TGDIGSAVCRWLSARTGVAELLLVARQQQPLIDLQTELAGGRILSLEEALPEADVVVWVASMPRTLEIDMESLRKPCLMI DGGYPKNLDAKFAGSGVHVLKGGIVEFCNDISWDVGWIAEMDKPARQMFACFAEAMLLEFENCHTNFSWGRNQITLEKMD FIGMASLRHGFSSLNLNHQLQAAAA
Sequences:
>Translated_345_residues MFGLIGHSTSFEDARKTALQIGYDHLDGDLDVWCSAPPQFLEQIEVESLTGKKIEGAYIDSCFVPEMLSRFKTARRKVLN AMEMAQKRGIQISALGGFTSIIFENFNLLKHQHVRNTTLEWERFTTGNTHTAWVICRQLENNAPLLGIDLSKARVAVVGA TGDIGSAVCRWLSARTGVAELLLVARQQQPLIDLQTELAGGRILSLEEALPEADVVVWVASMPRTLEIDMESLRKPCLMI DGGYPKNLDAKFAGSGVHVLKGGIVEFCNDISWDVGWIAEMDKPARQMFACFAEAMLLEFENCHTNFSWGRNQITLEKMD FIGMASLRHGFSSLNLNHQLQAAAA >Mature_345_residues MFGLIGHSTSFEDARKTALQIGYDHLDGDLDVWCSAPPQFLEQIEVESLTGKKIEGAYIDSCFVPEMLSRFKTARRKVLN AMEMAQKRGIQISALGGFTSIIFENFNLLKHQHVRNTTLEWERFTTGNTHTAWVICRQLENNAPLLGIDLSKARVAVVGA TGDIGSAVCRWLSARTGVAELLLVARQQQPLIDLQTELAGGRILSLEEALPEADVVVWVASMPRTLEIDMESLRKPCLMI DGGYPKNLDAKFAGSGVHVLKGGIVEFCNDISWDVGWIAEMDKPARQMFACFAEAMLLEFENCHTNFSWGRNQITLEKMD FIGMASLRHGFSSLNLNHQLQAAAA
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38290; Mature: 38290
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLIGHSTSFEDARKTALQIGYDHLDGDLDVWCSAPPQFLEQIEVESLTGKKIEGAYID CCCCCCCCCCHHHHHHHHHHHCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEC SCFVPEMLSRFKTARRKVLNAMEMAQKRGIQISALGGFTSIIFENFNLLKHQHVRNTTLE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCC WERFTTGNTHTAWVICRQLENNAPLLGIDLSKARVAVVGATGDIGSAVCRWLSARTGVAE EEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHHH LLLVARQQQPLIDLQTELAGGRILSLEEALPEADVVVWVASMPRTLEIDMESLRKPCLMI HHHHHHCCCCCHHHHHHHCCCEEEEHHHHCCCCCEEEEEECCCCEEEECHHHCCCCEEEE DGGYPKNLDAKFAGSGVHVLKGGIVEFCNDISWDVGWIAEMDKPARQMFACFAEAMLLEF ECCCCCCCCCEECCCCHHHHHCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ENCHTNFSWGRNQITLEKMDFIGMASLRHGFSSLNLNHQLQAAAA HHCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure MFGLIGHSTSFEDARKTALQIGYDHLDGDLDVWCSAPPQFLEQIEVESLTGKKIEGAYID CCCCCCCCCCHHHHHHHHHHHCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEC SCFVPEMLSRFKTARRKVLNAMEMAQKRGIQISALGGFTSIIFENFNLLKHQHVRNTTLE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCC WERFTTGNTHTAWVICRQLENNAPLLGIDLSKARVAVVGATGDIGSAVCRWLSARTGVAE EEEECCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHHH LLLVARQQQPLIDLQTELAGGRILSLEEALPEADVVVWVASMPRTLEIDMESLRKPCLMI HHHHHHCCCCCHHHHHHHCCCEEEEHHHHCCCCCEEEEEECCCCEEEECHHHCCCCEEEE DGGYPKNLDAKFAGSGVHVLKGGIVEFCNDISWDVGWIAEMDKPARQMFACFAEAMLLEF ECCCCCCCCCEECCCCHHHHHCCHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ENCHTNFSWGRNQITLEKMDFIGMASLRHGFSSLNLNHQLQAAAA HHCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA