| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863499
Identifier: 33863499
GI number: 33863499
Start: 1317874
End: 1318605
Strand: Reverse
Name: 33863499
Synonym: PMT1231
Alternate gene names: NA
Gene position: 1318605-1317874 (Counterclockwise)
Preceding gene: 33863500
Following gene: 33863498
Centisome position: 54.69
GC content: 50.55
Gene sequence:
>732_bases ATGCCTACGCTTGAGATGCCTGTGGCAGCTGTTCTTGACAGCACTGTTGGATCTTCAGAAGCCCTGCCAGACTTCACTTC AGATAGATATAAGGATGCATACAGCAGAATCAACGCAATAGTCATTGAGGGCGAACAGGAAGCCCATGACAATTACATCG CGATTGGCACGCTGCTTCCCGATCATGTCGAAGAGCTCAAGCGGCTTGCCAAGATGGAGATGAGGCACAAGAAGGGCTTT ACAGCTTGCGGCAAGAACCTTGGCGTTGAGGCTGACATGGACTTCGCAAGGGAGTTTTTTGCTCCTTTGCGTGACAACTT CCAGACAGCTTTAGGGCAGGGGAAAACACCTACATGCTTGCTGATCCAGGCGCTCTTGATTGAAGCCTTTGCTATTTCGG CTTATCACACCTATATCCCTGTTTCTGACCCCTTTGCTCGCAAGATTACTGAAGGTGTCGTGAAGGACGAGTACACACAC CTCAATTATGGCGAGGCTTGGCTCAAGGCCAATCTGGAGAGTTGCCGTGAGGAGTTGCTTGAGGCCAATCGCGAGAACCT GCCTCTGATTCGCCGGATGCTTGATCAGGTAGCAGGTGATGCTGCCGTGCTGCAGATGGATAAGGAAGATCTGATTGAGG ATTTCTTAATCGCCTACCAGGAATCTCTCACTGAGATTGGCTTTAACACTCGTGAAATTACCCGTATGGCAGCGGCAGCT CTTGTGAGCTGA
Upstream 100 bases:
>100_bases CGGTGAGAGAACCAGAATGCTTGTGATTTAAAGGGCGGCTTGAGTCAATTTTCCCTAGTAGAGGGTTAAAGTCTCTCGAC TTACGACTTTTAAAAGATCC
Downstream 100 bases:
>100_bases ACTCTGCTGCTTATGGGCCTTCCTTTCCCCTTGTATCCATTCGTGAGCAGCTTGGTCGAAGTTCAAACACTGGACCGTAA AGACCAGCATTAATGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPTLEMPVAAVLDSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLPDHVEELKRLAKMEMRHKKGF TACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTH LNYGEAWLKANLESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNTREITRMAAAA LVS
Sequences:
>Translated_243_residues MPTLEMPVAAVLDSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLPDHVEELKRLAKMEMRHKKGF TACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTH LNYGEAWLKANLESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNTREITRMAAAA LVS >Mature_242_residues PTLEMPVAAVLDSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLPDHVEELKRLAKMEMRHKKGFT ACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTHL NYGEAWLKANLESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNTREITRMAAAAL VS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27179; Mature: 27048
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLEMPVAAVLDSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLP CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHCCCEEEEECCCH DHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNTREITRMAAAA HCCCCCCHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LVS HCC >Mature Secondary Structure PTLEMPVAAVLDSTVGSSEALPDFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLP CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHCCCEEEEECCCH DHVEELKRLAKMEMRHKKGFTACGKNLGVEADMDFAREFFAPLRDNFQTALGQGKTPTCL HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIQALLIEAFAISAYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH EANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIAYQESLTEIGFNTREITRMAAAA HCCCCCCHHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LVS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA