| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is folE [H]
Identifier: 33863495
GI number: 33863495
Start: 1314144
End: 1314911
Strand: Reverse
Name: folE [H]
Synonym: PMT1227
Alternate gene names: 33863495
Gene position: 1314911-1314144 (Counterclockwise)
Preceding gene: 33863496
Following gene: 33863493
Centisome position: 54.54
GC content: 46.35
Gene sequence:
>768_bases ATGACTTCCATCATCCCAGCATCATCGAAAGGCCTTGGCAATGACAAAAATGCTTCGCCTGACAATGGTCAAATTGCCAA TACAAGCAAGATTTCCGAGCGTATACGCGCACGGTTTGTTGCGGGAGGTGTTTCCTTTCTCGCTAACGATAATATTTCGG AATACATTCAACCAGGCGAGTTGCAAGAGCTTGAAGTAGAAGTTGCCGATCGAGTACGAGAACTACTTCAAAGCCTGTTG ATTGATATTCATAATGACCACAACACAGAAGAGACAGCCGAGCGAGTTGCTCGCATGTATCTCAACGAAGTTTTTAAGGG CCGTTATCAGAAACAGCCCAAGATTACAAGTTTTCCTAACGTTAAGCAGCTTGATGAGATTTATACTGTTGGACCAATCA CGATCCGTTCGGCCTGCTCCCACCACTTTGTGCCGATCATGGGTAACTGCTGGATTGGGATCAAGCCAGGGACCCGTGTG ATTGGACTCTCTAAGTTTGCAAGAGTTGCCGATTGGGTATTTTCAAGACCTCATATTCAGGAAGAGGCCGTAATGATCTT GGCTGATGAAATTGAGCGGCTATGTGAGCCTCAGGGGCTTGGAATTATTGTCAAGGCAGAGCATTATTGCATGAAATTAC GTGGCGTAATGGAACCCCAGTGCACCATGGTGAACTCAGTTGTGCGAGGTGTTTTCAGGCATGACTCTAGCCTTAAACAG GAATTCTTTGAGCTCGTTCGTCAGCAGGAGGCCATGCTTGCAACATAA
Upstream 100 bases:
>100_bases CTGCCGCTGCCCTTCTTCACTTGGCCCAACAGCCACCATCACAGGTGATTGAAGATCTAACTCTGATGCCAGCCACTGGC GCCTTTTGAACCAGCCTTTA
Downstream 100 bases:
>100_bases AAGATCTCTCTAGATCTTGCCAAGAAAGAACATTTTGGCGATGGCCATGTCTGATTAACATGTGTGTATCCACTTCGCTT GTTACTAGCCAAGTGGATGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTSIIPASSKGLGNDKNASPDNGQIANTSKISERIRARFVAGGVSFLANDNISEYIQPGELQELEVEVADRVRELLQSLL IDIHNDHNTEETAERVARMYLNEVFKGRYQKQPKITSFPNVKQLDEIYTVGPITIRSACSHHFVPIMGNCWIGIKPGTRV IGLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPQGLGIIVKAEHYCMKLRGVMEPQCTMVNSVVRGVFRHDSSLKQ EFFELVRQQEAMLAT
Sequences:
>Translated_255_residues MTSIIPASSKGLGNDKNASPDNGQIANTSKISERIRARFVAGGVSFLANDNISEYIQPGELQELEVEVADRVRELLQSLL IDIHNDHNTEETAERVARMYLNEVFKGRYQKQPKITSFPNVKQLDEIYTVGPITIRSACSHHFVPIMGNCWIGIKPGTRV IGLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPQGLGIIVKAEHYCMKLRGVMEPQCTMVNSVVRGVFRHDSSLKQ EFFELVRQQEAMLAT >Mature_254_residues TSIIPASSKGLGNDKNASPDNGQIANTSKISERIRARFVAGGVSFLANDNISEYIQPGELQELEVEVADRVRELLQSLLI DIHNDHNTEETAERVARMYLNEVFKGRYQKQPKITSFPNVKQLDEIYTVGPITIRSACSHHFVPIMGNCWIGIKPGTRVI GLSKFARVADWVFSRPHIQEEAVMILADEIERLCEPQGLGIIVKAEHYCMKLRGVMEPQCTMVNSVVRGVFRHDSSLKQE FFELVRQQEAMLAT
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=123, Percent_Identity=39.0243902439024, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4503949, Length=123, Percent_Identity=39.0243902439024, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1788476, Length=183, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17560486, Length=125, Percent_Identity=35.2, Blast_Score=98, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=31.3186813186813, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI24656782, Length=125, Percent_Identity=35.2, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24656796, Length=125, Percent_Identity=35.2, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24656791, Length=125, Percent_Identity=35.2, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 28712; Mature: 28581
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIIPASSKGLGNDKNASPDNGQIANTSKISERIRARFVAGGVSFLANDNISEYIQPGE CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC LQELEVEVADRVRELLQSLLIDIHNDHNTEETAERVARMYLNEVFKGRYQKQPKITSFPN HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VKQLDEIYTVGPITIRSACSHHFVPIMGNCWIGIKPGTRVIGLSKFARVADWVFSRPHIQ HHHHHHHHHCCCHHHHHHHCCCCEEEECCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCH EEAVMILADEIERLCEPQGLGIIVKAEHYCMKLRGVMEPQCTMVNSVVRGVFRHDSSLKQ HHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHH EFFELVRQQEAMLAT HHHHHHHHHHHHCCC >Mature Secondary Structure TSIIPASSKGLGNDKNASPDNGQIANTSKISERIRARFVAGGVSFLANDNISEYIQPGE CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC LQELEVEVADRVRELLQSLLIDIHNDHNTEETAERVARMYLNEVFKGRYQKQPKITSFPN HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VKQLDEIYTVGPITIRSACSHHFVPIMGNCWIGIKPGTRVIGLSKFARVADWVFSRPHIQ HHHHHHHHHCCCHHHHHHHCCCCEEEECCEEEEECCCCEEEHHHHHHHHHHHHHCCCCCH EEAVMILADEIERLCEPQGLGIIVKAEHYCMKLRGVMEPQCTMVNSVVRGVFRHDSSLKQ HHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHH EFFELVRQQEAMLAT HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA