| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863442
Identifier: 33863442
GI number: 33863442
Start: 1264084
End: 1264299
Strand: Reverse
Name: 33863442
Synonym: PMT1172
Alternate gene names: NA
Gene position: 1264299-1264084 (Counterclockwise)
Preceding gene: 33863443
Following gene: 33863441
Centisome position: 52.44
GC content: 53.7
Gene sequence:
>216_bases ATGTCTGTTGTTCAAGTGAAAAACCTGCAGCGCCGACTAGACAATTTGTCTTGTGAGGCTATTCAGGAGCTCGATCGGGC TTGTGGGCATGAGCTTTGGCGCAACCTTGGCTTCGATGCCTTTGACGGCCTAGAGGATGCTGAGCGCCGGGCTAGGGCCA ATTACTACTACGGCCAGTTGCAGACAGTGAATGAGCTACTGGAGGCCTTGGGCTAA
Upstream 100 bases:
>100_bases AAGCAGGAAAAAGCTGCCTTTTTAAGGAATCCTCCATCCAATACTGGCGTGAGGATGGTTTATTTGTACTATTAGCAATA TCTGTTTTGCTCCTGCTGGC
Downstream 100 bases:
>100_bases TGCCCTTGGGTCATGCAGGTTTAGCCACCGATTCTTTCCCTGCCGACCACAATGGATTGATCTTTCTTGAAGGGCTTGAT TCATGAGCAGTAGTTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSVVQVKNLQRRLDNLSCEAIQELDRACGHELWRNLGFDAFDGLEDAERRARANYYYGQLQTVNELLEALG
Sequences:
>Translated_71_residues MSVVQVKNLQRRLDNLSCEAIQELDRACGHELWRNLGFDAFDGLEDAERRARANYYYGQLQTVNELLEALG >Mature_70_residues SVVQVKNLQRRLDNLSCEAIQELDRACGHELWRNLGFDAFDGLEDAERRARANYYYGQLQTVNELLEALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8187; Mature: 8056
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVQVKNLQRRLDNLSCEAIQELDRACGHELWRNLGFDAFDGLEDAERRARANYYYGQL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QTVNELLEALG HHHHHHHHHHC >Mature Secondary Structure SVVQVKNLQRRLDNLSCEAIQELDRACGHELWRNLGFDAFDGLEDAERRARANYYYGQL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QTVNELLEALG HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA