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The map label for this gene is crtL1 [H]

Identifier: 33863394

GI number: 33863394

Start: 1214517

End: 1215716

Strand: Reverse

Name: crtL1 [H]

Synonym: PMT1123

Alternate gene names: 33863394

Gene position: 1215716-1214517 (Counterclockwise)

Preceding gene: 33863395

Following gene: 33863392

Centisome position: 50.43

GC content: 52.92

Gene sequence:

>1200_bases
ATGGGAGCTGGTCCGGCGGCTCTCTGTATCGTTGCTGAGTTAGTCGAGCAAGGCTTGGCAGTGACTGCCCTCGCCTCGCA
TACACCTGAGCAGCCATGGCCCAATACTTATGGAATCTGGGCTGAGGAGCTTGAGTCTCTTGGGATGGCTTCTTTACTGG
GCCAGCGTTGGACCAACACAGTTAGCTATTTCGGTGATGGTGATAACGAGGAGGGTCTTGCTCCAATTCAACATCATTTC
GACTACGGCCTTTTCGATCCAGCCGCATTACAAGATTCATTGCTGAGTCGTTGTGGTGAATTGAGTTGGAATGTTGAAAC
CGCTGTGAGCATTAAGGTGTTGGGGAGAGATACGGAAGTTCTCTGTCACTCTGGCAACGCTTATCGAGCACGGGTTGTCA
TTGATGCCAGTGGTCATCGCAGTCGATTTATCCGTCGCCCTGATCATGGGCCCGTAGCGGAGCAGGCGGCCTATGGCGTC
GTGGGACGCTTCAGTTCATCACCAGTGGAGTCTGGTCAGTTCGTATTAATGGATTTTCGTCCCGACCATCTCAGTGATGA
ACAACGAGAGAAACCCCCCAGCTTTCTCTATGCCATGGATTTTGGTGAGGGAATCTTTTTTGTTGAGGAGACTTCGCTTG
CCTGCGCGCCTCCATTGTCATGGAGTGAATTAAGGGAAAGGCTGCATGCACGCTTGTCTCACCGCGGGGTGGAGATTAAA
GAAGTGATCCATGAGGAATATTGCCTGTTCCCGATGAACTTGCCTTTGCCTGATCGTCGTCAACCTTTGCTCGCGTTTGG
TGGTGCAGCAAGCATGGTCCATCCTGCTTCGGGCTACATGGTTGGAGCTCTTTTACGTCGAGCTCCGGCATTGGCAAAGC
ATTTGGCAATGGCTTTGGCTGTGGAGCCTCCTCTGGATTCTTCCGCTCTTGCTAGGGAAGGGTGGCAGGTGCTTTGGTCG
CCGGAGCTTGTGCAGCGTCATCGCCTTTATCAGTTTGGTTTGCGGCGACTGATGAGCTTTGACGAAGCTCGCTTGCGCAG
CTTCTTTGCCACTTTCTTTCGGTTGCCACGTGAGGATTGGGCAGGTTTTCTGGCCAACACGCTGCCACTACCTCGTCTTC
TGATGGTGATGCTGCGGTTGTTCTTGCTTTCCTCCTGGGAGATTCGGTTAGGGATGCTTTTTGGGGCCTCTTCGACCTAG

Upstream 100 bases:

>100_bases
ATCAGGACCAGCCAGATGATCGATCTGATCCCAGTGAAGTGGCTGGGGTTGACGACGCTCCTTCCAGCTGACATTGACCA
GTCGTACGGATGTTTTAGTG

Downstream 100 bases:

>100_bases
TCACGAATGCGAGCCCAGTCCGTCGCTTGAATGAATGGGAAGAGGCCATCTTCCGATTCGAGTGTGATCAGCCAGTCTTC
GGGCAGATGTTGCTTGTCAT

Product: lycopene beta cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MGAGPAALCIVAELVEQGLAVTALASHTPEQPWPNTYGIWAEELESLGMASLLGQRWTNTVSYFGDGDNEEGLAPIQHHF
DYGLFDPAALQDSLLSRCGELSWNVETAVSIKVLGRDTEVLCHSGNAYRARVVIDASGHRSRFIRRPDHGPVAEQAAYGV
VGRFSSSPVESGQFVLMDFRPDHLSDEQREKPPSFLYAMDFGEGIFFVEETSLACAPPLSWSELRERLHARLSHRGVEIK
EVIHEEYCLFPMNLPLPDRRQPLLAFGGAASMVHPASGYMVGALLRRAPALAKHLAMALAVEPPLDSSALAREGWQVLWS
PELVQRHRLYQFGLRRLMSFDEARLRSFFATFFRLPREDWAGFLANTLPLPRLLMVMLRLFLLSSWEIRLGMLFGASST

Sequences:

>Translated_399_residues
MGAGPAALCIVAELVEQGLAVTALASHTPEQPWPNTYGIWAEELESLGMASLLGQRWTNTVSYFGDGDNEEGLAPIQHHF
DYGLFDPAALQDSLLSRCGELSWNVETAVSIKVLGRDTEVLCHSGNAYRARVVIDASGHRSRFIRRPDHGPVAEQAAYGV
VGRFSSSPVESGQFVLMDFRPDHLSDEQREKPPSFLYAMDFGEGIFFVEETSLACAPPLSWSELRERLHARLSHRGVEIK
EVIHEEYCLFPMNLPLPDRRQPLLAFGGAASMVHPASGYMVGALLRRAPALAKHLAMALAVEPPLDSSALAREGWQVLWS
PELVQRHRLYQFGLRRLMSFDEARLRSFFATFFRLPREDWAGFLANTLPLPRLLMVMLRLFLLSSWEIRLGMLFGASST
>Mature_398_residues
GAGPAALCIVAELVEQGLAVTALASHTPEQPWPNTYGIWAEELESLGMASLLGQRWTNTVSYFGDGDNEEGLAPIQHHFD
YGLFDPAALQDSLLSRCGELSWNVETAVSIKVLGRDTEVLCHSGNAYRARVVIDASGHRSRFIRRPDHGPVAEQAAYGVV
GRFSSSPVESGQFVLMDFRPDHLSDEQREKPPSFLYAMDFGEGIFFVEETSLACAPPLSWSELRERLHARLSHRGVEIKE
VIHEEYCLFPMNLPLPDRRQPLLAFGGAASMVHPASGYMVGALLRRAPALAKHLAMALAVEPPLDSSALAREGWQVLWSP
ELVQRHRLYQFGLRRLMSFDEARLRSFFATFFRLPREDWAGFLANTLPLPRLLMVMLRLFLLSSWEIRLGMLFGASST

Specific function: Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lycopene cyclase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR000103 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 44506; Mature: 44375

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGPAALCIVAELVEQGLAVTALASHTPEQPWPNTYGIWAEELESLGMASLLGQRWTNT
CCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
VSYFGDGDNEEGLAPIQHHFDYGLFDPAALQDSLLSRCGELSWNVETAVSIKVLGRDTEV
HHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEE
LCHSGNAYRARVVIDASGHRSRFIRRPDHGPVAEQAAYGVVGRFSSSPVESGQFVLMDFR
EEECCCCEEEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PDHLSDEQREKPPSFLYAMDFGEGIFFVEETSLACAPPLSWSELRERLHARLSHRGVEIK
CCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
EVIHEEYCLFPMNLPLPDRRQPLLAFGGAASMVHPASGYMVGALLRRAPALAKHLAMALA
HHHHHHHEEEECCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHE
VEPPLDSSALAREGWQVLWSPELVQRHRLYQFGLRRLMSFDEARLRSFFATFFRLPREDW
ECCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AGFLANTLPLPRLLMVMLRLFLLSSWEIRLGMLFGASST
HHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure 
GAGPAALCIVAELVEQGLAVTALASHTPEQPWPNTYGIWAEELESLGMASLLGQRWTNT
CCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
VSYFGDGDNEEGLAPIQHHFDYGLFDPAALQDSLLSRCGELSWNVETAVSIKVLGRDTEV
HHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEE
LCHSGNAYRARVVIDASGHRSRFIRRPDHGPVAEQAAYGVVGRFSSSPVESGQFVLMDFR
EEECCCCEEEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PDHLSDEQREKPPSFLYAMDFGEGIFFVEETSLACAPPLSWSELRERLHARLSHRGVEIK
CCCCCCHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
EVIHEEYCLFPMNLPLPDRRQPLLAFGGAASMVHPASGYMVGALLRRAPALAKHLAMALA
HHHHHHHEEEECCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHE
VEPPLDSSALAREGWQVLWSPELVQRHRLYQFGLRRLMSFDEARLRSFFATFFRLPREDW
ECCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AGFLANTLPLPRLLMVMLRLFLLSSWEIRLGMLFGASST
HHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7919981 [H]