| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863245
Identifier: 33863245
GI number: 33863245
Start: 1051252
End: 1051617
Strand: Reverse
Name: 33863245
Synonym: PMT0974
Alternate gene names: NA
Gene position: 1051617-1051252 (Counterclockwise)
Preceding gene: 33863246
Following gene: 33863241
Centisome position: 43.62
GC content: 43.99
Gene sequence:
>366_bases TTGCAAATGGATCGAAATGTTTTAGGCGAACCTCTCGAGATTTGTAGTTGTGATCCGAAAACGGGTTGGTATCGAGACGG AAAATGTAGAACTGATGGGCATGACCTTGGTCAGCATACGGTTTGCTGCGTGATCAGCGAGCAATTTCTGACCTATAGCA AAGCTCAAGGGAACGATCTATCAACGCCAATTCCTCAGTATGGCTTCTCAGGCTTGAAACCAGGAGATCATTGGTGTGTA TGTGCATCTCGTTGGAAACAAGCCTATGATGATGGCATGGCACCAAATATTCGATTAGAGGCAACGAATATTGAGGTTTT GGCAGCTATAGATCTTCAGATACTCAAGCAATACAGTCATACTTGA
Upstream 100 bases:
>100_bases GGCAGGCAGAACACTACCTATATTTATCTAAAGCAGATGCTAAGGCTCAGTTGCTATTGCCTTGTGGCTTTAAACCTATA GGATTTAGCTAATTAGTCAT
Downstream 100 bases:
>100_bases GCTGCATCAATCTTTGAGAATTGAGAGCGCTGAGAAGCATGATCGATATCTCGGACGTGACAAAGAATCATTATTTAATA CTCTTCAAACAATACTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MQMDRNVLGEPLEICSCDPKTGWYRDGKCRTDGHDLGQHTVCCVISEQFLTYSKAQGNDLSTPIPQYGFSGLKPGDHWCV CASRWKQAYDDGMAPNIRLEATNIEVLAAIDLQILKQYSHT
Sequences:
>Translated_121_residues MQMDRNVLGEPLEICSCDPKTGWYRDGKCRTDGHDLGQHTVCCVISEQFLTYSKAQGNDLSTPIPQYGFSGLKPGDHWCV CASRWKQAYDDGMAPNIRLEATNIEVLAAIDLQILKQYSHT >Mature_121_residues MQMDRNVLGEPLEICSCDPKTGWYRDGKCRTDGHDLGQHTVCCVISEQFLTYSKAQGNDLSTPIPQYGFSGLKPGDHWCV CASRWKQAYDDGMAPNIRLEATNIEVLAAIDLQILKQYSHT
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13566; Mature: 13566
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMDRNVLGEPLEICSCDPKTGWYRDGKCRTDGHDLGQHTVCCVISEQFLTYSKAQGNDL CCCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCC STPIPQYGFSGLKPGDHWCVCASRWKQAYDDGMAPNIRLEATNIEVLAAIDLQILKQYSH CCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCEEEEEHHHHHHHHHHCC T C >Mature Secondary Structure MQMDRNVLGEPLEICSCDPKTGWYRDGKCRTDGHDLGQHTVCCVISEQFLTYSKAQGNDL CCCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCC STPIPQYGFSGLKPGDHWCVCASRWKQAYDDGMAPNIRLEATNIEVLAAIDLQILKQYSH CCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCEEEEEHHHHHHHHHHCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA