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The map label for this gene is 33863241

Identifier: 33863241

GI number: 33863241

Start: 1048734

End: 1049024

Strand: Reverse

Name: 33863241

Synonym: PMT0970

Alternate gene names: NA

Gene position: 1049024-1048734 (Counterclockwise)

Preceding gene: 33863245

Following gene: 33863240

Centisome position: 43.51

GC content: 46.05

Gene sequence:

>291_bases
TTGCGAATCAAAATCCATCGATCAATCCATCGCATCTTTGAGGGAACCCCAGAGCTTCTTTGCTTGCGCAAGGTTTCAAA
GCAAACGCTTCTCTCCTGTGATCTTGTTGATGACATAGAACCGCTACTCGCTTGGATCGCTGGTTTCGCCGTTGATCTGA
TCTTCAGCAATAAGAGGCCCGATCCAATTCTTCTCAGGTTGGGAGCAACTTTTATTGTTCTTGCTCTATCTAGTCATGTA
AGCCCATCAGATGTGTGCAAGGCTTCTCTTATGCAACACGCTCTGAGTTGA

Upstream 100 bases:

>100_bases
AGCATGACGCCATCAGAATTTCCGACCGAACCAAAAAGGTCGTAAGAACCAGGGCCGGTCGGCGATAGACATCACCACCT
GAACGGCTCGTGTACGGTTT

Downstream 100 bases:

>100_bases
GATGAATGCTGGCTATATCGCTCTTGGGATCTGTTTGCTTGTCTTCCTTGGCCTTCAGTTTTGGTGGGTAGGAATGACGA
TGAGAAATGGCCGTGGTGGG

Product: capsid protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRIKIHRSIHRIFEGTPELLCLRKVSKQTLLSCDLVDDIEPLLAWIAGFAVDLIFSNKRPDPILLRLGATFIVLALSSHV
SPSDVCKASLMQHALS

Sequences:

>Translated_96_residues
MRIKIHRSIHRIFEGTPELLCLRKVSKQTLLSCDLVDDIEPLLAWIAGFAVDLIFSNKRPDPILLRLGATFIVLALSSHV
SPSDVCKASLMQHALS
>Mature_96_residues
MRIKIHRSIHRIFEGTPELLCLRKVSKQTLLSCDLVDDIEPLLAWIAGFAVDLIFSNKRPDPILLRLGATFIVLALSSHV
SPSDVCKASLMQHALS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10692; Mature: 10692

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKIHRSIHRIFEGTPELLCLRKVSKQTLLSCDLVDDIEPLLAWIAGFAVDLIFSNKRP
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPILLRLGATFIVLALSSHVSPSDVCKASLMQHALS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIKIHRSIHRIFEGTPELLCLRKVSKQTLLSCDLVDDIEPLLAWIAGFAVDLIFSNKRP
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DPILLRLGATFIVLALSSHVSPSDVCKASLMQHALS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA