The gene/protein map for NC_005071 is currently unavailable.
Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863239

Identifier: 33863239

GI number: 33863239

Start: 1047681

End: 1047923

Strand: Reverse

Name: 33863239

Synonym: PMT0968

Alternate gene names: NA

Gene position: 1047923-1047681 (Counterclockwise)

Preceding gene: 33863240

Following gene: 33863238

Centisome position: 43.47

GC content: 52.26

Gene sequence:

>243_bases
TTGGGGTCAGGCAACAAATACGGCGCGTCGCACCTCATCTCACGCATCATTGTCAGTCGCCCATCAAGATCTTGCCTTCG
TCATACGTCTCTGGCGGGTCAGGAATGGGCTGTTCCTCTGGGTTTTGTGGGATGGCTTCTTCCATCCCTAAATCGATCTG
CACGAAAAGAAGAGACAAAACGCCAATCAGTCATGCAGCCACTGCCAGTAGAGACCAATGGCGAAGGTCCATACAGCGAT
TAG

Upstream 100 bases:

>100_bases
AGGCAGGCTCAGCCTTCATCGAGCGGCCTTGGACAACTCGATATCGCGATCGAGATCGCTAGGGCCAGCGCAATCCATGA
ATTGCAGAAACCACTAGCCC

Downstream 100 bases:

>100_bases
GCAAGCACATGGACCTCTTCTACTGGATTTTGCCCTCACCCCTATTGAGCAAACGAATCAATCTCTTGATGGGGGTGGAC
AGGAGGGAATCAAACCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MGSGNKYGASHLISRIIVSRPSRSCLRHTSLAGQEWAVPLGFVGWLLPSLNRSARKEETKRQSVMQPLPVETNGEGPYSD

Sequences:

>Translated_80_residues
MGSGNKYGASHLISRIIVSRPSRSCLRHTSLAGQEWAVPLGFVGWLLPSLNRSARKEETKRQSVMQPLPVETNGEGPYSD
>Mature_79_residues
GSGNKYGASHLISRIIVSRPSRSCLRHTSLAGQEWAVPLGFVGWLLPSLNRSARKEETKRQSVMQPLPVETNGEGPYSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8794; Mature: 8663

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGNKYGASHLISRIIVSRPSRSCLRHTSLAGQEWAVPLGFVGWLLPSLNRSARKEETK
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
RQSVMQPLPVETNGEGPYSD
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GSGNKYGASHLISRIIVSRPSRSCLRHTSLAGQEWAVPLGFVGWLLPSLNRSARKEETK
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
RQSVMQPLPVETNGEGPYSD
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA