| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is metG [H]
Identifier: 33863015
GI number: 33863015
Start: 812071
End: 813618
Strand: Direct
Name: metG [H]
Synonym: PMT0743
Alternate gene names: 33863015
Gene position: 812071-813618 (Clockwise)
Preceding gene: 33863013
Following gene: 33863016
Centisome position: 33.68
GC content: 44.9
Gene sequence:
>1548_bases ATGATGACCTATACCATTACGACCCCTCTTTACTACGTCAATGACAAGCCCCATCTAGGCAGCCTGTACACAACCATGGC CAGTGATGCACTGGCTCGTTTCCAGAGACTAGAAGGTAAGCAGGTCATGTTTGTTACAGGTGTCGATGAACACGGCCAGA AGATTCAACGCACAGCAGAAGGCAATAACATCAGCCCCAAACATCATTGTGATCAGATCACAAGGAGTTATCAAAATCTA TGGTCTCGTTGGGGTATTTCAAATGATCGCTTCATTCGTACAACCAGCCACCGCCATCAGTTACTAGTAGAGGCTTTTTT TCACCGTGTCGAGACCTCCGGCGATGTATATCTTGGTCGGCAGCAGGGTTGGTATTGCGTCGGTTGTGAAGAATACAAGG ACGAACCTCCACAAGCCCAGTCACCATGTTGCCCTATTCACCAGAAGCCTCTTGAATGGAGGGATGAGGAGAATCTTTTT TTCAAACTCTCTCGTTTCCAATCAAAAATCGAAGATCTCATTTCGCAGCCGGATTTCATCTGGCCAGTCATGCGCCGCAA TGAAATACAGAATTTTGTAGCTCAGGGTCTTAGGGATTTTTCAATTTCAAGAGTTGATGTTGATTGGGGCCTACCTGTAC CTGGTTATCCAAAACACACTTTTTATGTCTGGTTTGATGCGCTTGTAGGCTATTTGAGTGCTCTTTTAGATGATGGTGGC CAGGTTCGAATAGAACGTCTTGAGGAGTGCGGATGGCCTGCATCAGTACATTTAATTGGCAAGGATATCCTCCGTTTTCA TGCAGTCTACTGGCCCGCAATGCTGATCTCAGCTGGCTTACCCTTGCCAAAACAAGTTTTTGGCCACGGCTTTCTCACTC GTGAAGGTCAAAAGATGGGTAAATCACTAGGAAATGTTCTTGATCCAGAGAAACTGCTAGAAATATGTGGTGCAGATGCT GTTCGATGGTATTTATTGCGTGACATCCAGTTCGGTCATGATGGTGACTTTCAGCAGAAAAGATTTATGGATTTAGTTAA TAACGACTTGGCAAATACAATCGGAAATCTGCTGAACCGAACTTCGACTATGGCAAGAAAATGGTTTGAAGGATCTGTCC CTACACATCGCGATGAAATAGATTACGCTCATCCCTTAGTGACCACTGCTGAAACAACAATTACCATCGTACGTCAATCA ATGCCATCCATGGCTTTTCATGATGCAGCTGAGGCGATCCTTAAATTGGCTATAGCAGCCAACGTCTACCTCAACGAAAC TGCACCTTGGAGTCGAATGAAGACGCCTGGCAATGAAGCCGAAGTGGCTGATGATCTTTACTCAGTTTTGGAAGCATGCC GACTTGTAGGACTATTAATTAATCCTCTTGTACCTTCTCTAAGCGAACGCTTGCTCAACCAATTGGGATTAAGTATTGAT GGCAACGATTGGTCTAAAGGTTTAGCTTGGGGACAATTGCAAAGTGGAGCTTTATTGCCACCATCTCAACCCGTAATGCA AAGACTAGAACTCTCTTCTTCCCTCTAA
Upstream 100 bases:
>100_bases GTCGGCTTGGTCTGAGAGATGACGGCAGACGATCAATAAGCTGAAATGAGTTGTCTGGTTATGATCCGGCCGCTCTGCGC AGCAGCAGAAACTCCCCAAA
Downstream 100 bases:
>100_bases TGCAATTCAACCTTCTACCATTACGTCATCTTGGCAGTCTGCTGCTGATCATAACGATGGTGGGATGTCAGGAATCGCCA TCACCACAGAAGAAATCATC
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MMTYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGNNISPKHHCDQITRSYQNL WSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQGWYCVGCEEYKDEPPQAQSPCCPIHQKPLEWRDEENLF FKLSRFQSKIEDLISQPDFIWPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGG QVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQKMGKSLGNVLDPEKLLEICGADA VRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLLNRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQS MPSMAFHDAAEAILKLAIAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLSID GNDWSKGLAWGQLQSGALLPPSQPVMQRLELSSSL
Sequences:
>Translated_515_residues MMTYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGNNISPKHHCDQITRSYQNL WSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQGWYCVGCEEYKDEPPQAQSPCCPIHQKPLEWRDEENLF FKLSRFQSKIEDLISQPDFIWPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGG QVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQKMGKSLGNVLDPEKLLEICGADA VRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLLNRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQS MPSMAFHDAAEAILKLAIAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLSID GNDWSKGLAWGQLQSGALLPPSQPVMQRLELSSSL >Mature_515_residues MMTYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAEGNNISPKHHCDQITRSYQNL WSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQGWYCVGCEEYKDEPPQAQSPCCPIHQKPLEWRDEENLF FKLSRFQSKIEDLISQPDFIWPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGG QVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQKMGKSLGNVLDPEKLLEICGADA VRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLLNRTSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQS MPSMAFHDAAEAILKLAIAANVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLSID GNDWSKGLAWGQLQSGALLPPSQPVMQRLELSSSL
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2A subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=504, Percent_Identity=35.515873015873, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI14043022, Length=551, Percent_Identity=25.2268602540835, Blast_Score=147, Evalue=2e-35, Organism=Escherichia coli, GI1788432, Length=500, Percent_Identity=26.8, Blast_Score=188, Evalue=8e-49, Organism=Caenorhabditis elegans, GI212645096, Length=494, Percent_Identity=31.3765182186235, Blast_Score=255, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71992781, Length=389, Percent_Identity=30.0771208226221, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17540794, Length=524, Percent_Identity=26.5267175572519, Blast_Score=152, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6321610, Length=524, Percent_Identity=33.3969465648855, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6321704, Length=520, Percent_Identity=23.2692307692308, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI21358483, Length=505, Percent_Identity=32.4752475247525, Blast_Score=278, Evalue=8e-75, Organism=Drosophila melanogaster, GI24655311, Length=555, Percent_Identity=25.5855855855856, Blast_Score=164, Evalue=1e-40,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 58538; Mature: 58538
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAE CEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHC GNNISPKHHCDQITRSYQNLWSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEC QQGWYCVGCEEYKDEPPQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLISQPDFI CCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH WPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC QVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQKMG CCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHH KSLGNVLDPEKLLEICGADAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLLNR HHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLAIAA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLSID HEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNDWSKGLAWGQLQSGALLPPSQPVMQRLELSSSL CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MMTYTITTPLYYVNDKPHLGSLYTTMASDALARFQRLEGKQVMFVTGVDEHGQKIQRTAE CEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHC GNNISPKHHCDQITRSYQNLWSRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGR CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEC QQGWYCVGCEEYKDEPPQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLISQPDFI CCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH WPVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC QVRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISAGLPLPKQVFGHGFLTREGQKMG CCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHH KSLGNVLDPEKLLEICGADAVRWYLLRDIQFGHDGDFQQKRFMDLVNNDLANTIGNLLNR HHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TSTMARKWFEGSVPTHRDEIDYAHPLVTTAETTITIVRQSMPSMAFHDAAEAILKLAIAA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NVYLNETAPWSRMKTPGNEAEVADDLYSVLEACRLVGLLINPLVPSLSERLLNQLGLSID HEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNDWSKGLAWGQLQSGALLPPSQPVMQRLELSSSL CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]