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The map label for this gene is clpS [H]

Identifier: 33862944

GI number: 33862944

Start: 728313

End: 728609

Strand: Reverse

Name: clpS [H]

Synonym: PMT0672

Alternate gene names: 33862944

Gene position: 728609-728313 (Counterclockwise)

Preceding gene: 33862947

Following gene: 33862943

Centisome position: 30.22

GC content: 53.87

Gene sequence:

>297_bases
ATGACGTTCGCGACTCCTGGTACTACGCCACTTCTTGAACGTGCCAAGCAAACTCAGAGGTATCCACAAGCTCGAGTGAT
CGTGCTCAACGATGATGTAAACACCTTTCAGCACGTCGTTGATTGTCTGCGAAGGATCATTCCAGGCATGAGCGAGGAGA
GGGCCTGGAATCTTGCGCATCAAATCGACGGTCAAGGTTCAGCAGAGGTCTGGTGTGGTCCACTTGAGCAGGCCGAGCTC
TACCACCAGCAACTGTCTGGGGAGGGGCTAACAATGGCACCACTTGAACGGTGCTGA

Upstream 100 bases:

>100_bases
GTGAGGCCCAGGCGAGAGTGAACAACATAGAAGACGCAAATCAGATTGACTTAGCCTGGTAAGGCTTCAACCATTTTACA
CGTCAAAGCCTTCATCAGTC

Downstream 100 bases:

>100_bases
AACAAGGCAAAGCTGATCAACCTTCAATACAGCACAATGATCTTGTTGCTTTTTGCAAGACTGACAAAAGGCTTTTCGAG
CAGCAACGGCAAAAACATTC

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTFATPGTTPLLERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAHQIDGQGSAEVWCGPLEQAEL
YHQQLSGEGLTMAPLERC

Sequences:

>Translated_98_residues
MTFATPGTTPLLERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAHQIDGQGSAEVWCGPLEQAEL
YHQQLSGEGLTMAPLERC
>Mature_97_residues
TFATPGTTPLLERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAHQIDGQGSAEVWCGPLEQAELY
HQQLSGEGLTMAPLERC

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11035; Mature: 10903

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFATPGTTPLLERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAH
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QIDGQGSAEVWCGPLEQAELYHQQLSGEGLTMAPLERC
HCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TFATPGTTPLLERAKQTQRYPQARVIVLNDDVNTFQHVVDCLRRIIPGMSEERAWNLAH
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QIDGQGSAEVWCGPLEQAELYHQQLSGEGLTMAPLERC
HCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]