Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33862943

Identifier: 33862943

GI number: 33862943

Start: 727218

End: 727544

Strand: Reverse

Name: 33862943

Synonym: PMT0671

Alternate gene names: NA

Gene position: 727544-727218 (Counterclockwise)

Preceding gene: 33862944

Following gene: 33862942

Centisome position: 30.18

GC content: 47.09

Gene sequence:

>327_bases
TTGGCTAGTTTCGATCAATTACACGAAAAAGTTGCGATGGGTCGAGTTGTAATCACGCACAGCACCTACGTAGAGGGTCT
AATTCCATGGTTGAAGGCCCTTGCAGAGGAGAAGAACATTCAAACGATTACACCAGCCGTCATCCGACGCGTCAAAGGTC
ATTGTCCAGAACTTCGCCTGAGAATTACAACGCCGATCAAGGGTGGTTTCAAACTGGTTGCCAGACTTGGCAGCTCAGCT
CAGGAGGTTTTTGTTGTCACAAAATTGGACGAAGGGTCATTATTGAAACGACTTAATCACAGTCGTCCAGGCGTTCAAAA
GAGGTGA

Upstream 100 bases:

>100_bases
CTGGGAGCAAAAGTAGAATACTTGGGATCGAAACCACCGCAAGGAAAAATATAGGATTTAAGTATCGCCTCTTAGACAGA
GCTGCTTTCACCTTGAAACT

Downstream 100 bases:

>100_bases
ACCGCCATGCCGTGCGAGCCCCAGTGTTCGACCTGGAAGAACCAGAAGGGGAAGCAAAGTGGGGCTTCGTTTCCGGAAGC
AAGTCCGGTCTACGTCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MASFDQLHEKVAMGRVVITHSTYVEGLIPWLKALAEEKNIQTITPAVIRRVKGHCPELRLRITTPIKGGFKLVARLGSSA
QEVFVVTKLDEGSLLKRLNHSRPGVQKR

Sequences:

>Translated_108_residues
MASFDQLHEKVAMGRVVITHSTYVEGLIPWLKALAEEKNIQTITPAVIRRVKGHCPELRLRITTPIKGGFKLVARLGSSA
QEVFVVTKLDEGSLLKRLNHSRPGVQKR
>Mature_107_residues
ASFDQLHEKVAMGRVVITHSTYVEGLIPWLKALAEEKNIQTITPAVIRRVKGHCPELRLRITTPIKGGFKLVARLGSSAQ
EVFVVTKLDEGSLLKRLNHSRPGVQKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12067; Mature: 11936

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDQLHEKVAMGRVVITHSTYVEGLIPWLKALAEEKNIQTITPAVIRRVKGHCPELRL
CCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCEEE
RITTPIKGGFKLVARLGSSAQEVFVVTKLDEGSLLKRLNHSRPGVQKR
EEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASFDQLHEKVAMGRVVITHSTYVEGLIPWLKALAEEKNIQTITPAVIRRVKGHCPELRL
CCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCEEE
RITTPIKGGFKLVARLGSSAQEVFVVTKLDEGSLLKRLNHSRPGVQKR
EEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA