| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cbbA [H]
Identifier: 33862810
GI number: 33862810
Start: 585077
End: 586150
Strand: Direct
Name: cbbA [H]
Synonym: PMT0537
Alternate gene names: 33862810
Gene position: 585077-586150 (Clockwise)
Preceding gene: 33862809
Following gene: 33862815
Centisome position: 24.27
GC content: 52.33
Gene sequence:
>1074_bases ATGGCCCTCGTTCCGCTAAGGCTTCTGCTTGACCATGCCGCAGAAAACGGCTATGGCATCCCTGCTTTCAATGTGAACAA CCTCGAGCAGGTGCAGTCCATCATGGAAGCGGCTTACGAGACTGATAGCCCCGTGATCCTGCAGGCCTCCCGCGGTGCTC GAAGCTACGCAGGTGAAATCTTTTTAAGACATCTGATCATCGCCGCCGTTGAGACTTATCCAGACATCCCGGTTGTGATG CATCAAGACCACGGGAATAGCCCCTCAACATGCTTTGGTGCTGCAGCCAACGGGTTCACCTCTGTGATGATGGATGGTTC TCTTGAGGCAGACGCCAAGACACCTGCCAGCTACGAGTACAACGTTGCTGTCACAAAAGAAGTCGTAGGCGTGGCCCATG CCATTGGCGTAAGCGTGGAGGGTGAACTGGGCTGCCTGGGCTCCTTGGAAACAGGTATGGGTGAAGCCGAAGACGGCCAC GGATTTGAAGGCAAGCTCGACCACAGCCAACTGCTCACCGACCCAGCTGAGGCCTCCGACTTCGTCGCTAAAACCAAAGT TGACGCTTTAGCAATCGCGATTGGAACCAGCCACGGCGCCTACAAATTCACGCGCAAACCCACTGGTGAAGTATTAGCGA TCAGTCGAATTGCAGAAATCCATAAGGCCATCCCTAACACTCATTTAGTGATGCACGGTTCCTCTTCCGTTCCCCAGGAA TGGCTGCAAATGATCAATAAATACGGAGGTGCAATCCCTGAGACCTATGGCGTTCCTGTCGAAGAGATCCAAGAAGGGAT TCGCAATGGCGTGCGTAAGGTCAATATCGACACCGACAATCGCCTGGCTTTCACCGCTGCTGTGCGTGAAGCTTCTGTCG CTGATCCTGCCAACTTTGATCCACGCCACTTCAACAAACCTGCGCGTAAATATATGAAGCAGGTCTGTCTTGATCGCTAT CAGCAGTTTTGGTGTGCCGGCAATGCCAGTAAAATTAAGCAACGTGATATCAACTATTACTCAGCCCTTTATGAGAAAGG GCAGCTTGATCCAAAAAACGCTGTTGCTGCATGA
Upstream 100 bases:
>100_bases GATAGGTGACAGTTCTGACCATCGTCTTATAAAGTCCGGGGCCGCAGGTCCAGGACTCTTTGCTTGAGAACTGGCCCCTA CTGACACTACGGAGATCTCT
Downstream 100 bases:
>100_bases TTAAGGCCAAATGAATCGCTGAGGGGGGCTGCGAGGCCTCCCTTTTTAATGAATATGGCTTAGGACAACAACATTAGAGA TCCATTGCGTCCGTCGAGGC
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQSIMEAAYETDSPVILQASRGARSYAGEIFLRHLIIAAVETYPDIPVVM HQDHGNSPSTCFGAAANGFTSVMMDGSLEADAKTPASYEYNVAVTKEVVGVAHAIGVSVEGELGCLGSLETGMGEAEDGH GFEGKLDHSQLLTDPAEASDFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKAIPNTHLVMHGSSSVPQE WLQMINKYGGAIPETYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREASVADPANFDPRHFNKPARKYMKQVCLDRY QQFWCAGNASKIKQRDINYYSALYEKGQLDPKNAVAA
Sequences:
>Translated_357_residues MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQSIMEAAYETDSPVILQASRGARSYAGEIFLRHLIIAAVETYPDIPVVM HQDHGNSPSTCFGAAANGFTSVMMDGSLEADAKTPASYEYNVAVTKEVVGVAHAIGVSVEGELGCLGSLETGMGEAEDGH GFEGKLDHSQLLTDPAEASDFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKAIPNTHLVMHGSSSVPQE WLQMINKYGGAIPETYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREASVADPANFDPRHFNKPARKYMKQVCLDRY QQFWCAGNASKIKQRDINYYSALYEKGQLDPKNAVAA >Mature_356_residues ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQSIMEAAYETDSPVILQASRGARSYAGEIFLRHLIIAAVETYPDIPVVMH QDHGNSPSTCFGAAANGFTSVMMDGSLEADAKTPASYEYNVAVTKEVVGVAHAIGVSVEGELGCLGSLETGMGEAEDGHG FEGKLDHSQLLTDPAEASDFVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKAIPNTHLVMHGSSSVPQEW LQMINKYGGAIPETYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREASVADPANFDPRHFNKPARKYMKQVCLDRYQ QFWCAGNASKIKQRDINYYSALYEKGQLDPKNAVAA
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=335, Percent_Identity=33.4328358208955, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=31.306990881459, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1788072, Length=329, Percent_Identity=29.7872340425532, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789293, Length=337, Percent_Identity=25.2225519287834, Blast_Score=78, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6322790, Length=358, Percent_Identity=25.9776536312849, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38622; Mature: 38491
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVPLRLLLDHAAENGYGIPAFNVNNLEQVQSIMEAAYETDSPVILQASRGARSYAGEI CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH FLRHLIIAAVETYPDIPVVMHQDHGNSPSTCFGAAANGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCHHHEEECCCCCCCCCCCCCEEE NVAVTKEVVGVAHAIGVSVEGELGCLGSLETGMGEAEDGHGFEGKLDHSQLLTDPAEASD EEEEHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH FVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKAIPNTHLVMHGSSSVPQE HHHHHHHCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLQMINKYGGAIPETYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREASVADPANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHCCCCCCCCC PRHFNKPARKYMKQVCLDRYQQFWCAGNASKIKQRDINYYSALYEKGQLDPKNAVAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure ALVPLRLLLDHAAENGYGIPAFNVNNLEQVQSIMEAAYETDSPVILQASRGARSYAGEI CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH FLRHLIIAAVETYPDIPVVMHQDHGNSPSTCFGAAANGFTSVMMDGSLEADAKTPASYEY HHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCHHHEEECCCCCCCCCCCCCEEE NVAVTKEVVGVAHAIGVSVEGELGCLGSLETGMGEAEDGHGFEGKLDHSQLLTDPAEASD EEEEHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH FVAKTKVDALAIAIGTSHGAYKFTRKPTGEVLAISRIAEIHKAIPNTHLVMHGSSSVPQE HHHHHHHCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLQMINKYGGAIPETYGVPVEEIQEGIRNGVRKVNIDTDNRLAFTAAVREASVADPANFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHCCCCCCCCC PRHFNKPARKYMKQVCLDRYQQFWCAGNASKIKQRDINYYSALYEKGQLDPKNAVAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9298645 [H]