| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862716
Identifier: 33862716
GI number: 33862716
Start: 499865
End: 500632
Strand: Direct
Name: 33862716
Synonym: PMT0443
Alternate gene names: NA
Gene position: 499865-500632 (Clockwise)
Preceding gene: 33862715
Following gene: 33862717
Centisome position: 20.73
GC content: 50.0
Gene sequence:
>768_bases ATGGAACTCCGGCAAAATAGATTTCGATTTGCCCCAAGAGTTTTGAAGCTGTCTGTTTGCCTGCTGAGCCTATCCCTTGG ATTGCCTATGGGCCTGAGTGCACTAACCCTTCCGATTGTGGCAGCGCAGGAGACCATTCAAAAGACCACTTTGAGCCCTG CTGAGGCGACAAAAACAGCGCAAATCCTGCTCAAGGCATTAGTGGTGCAAGACGCCAAAACCATCTATGGCCAACTTTCA GAAGCTCTGCGCAGCACCACCACCACTGAACGGATCCAACAACGTCTGAAAAGGCGCCCTCAAGTCAAGTCAAGTCGCAT TGTCGACGTCTCACCAGGCATAGACGACACCACTGTCGACGCCATGGTTGAGACCATCGATGGAGACGTCCCGTTGATCA TGGTTCTCGATCAGGAAGGGAAATTGATCGCATGGAAATGGAGTGGTCAAGCATTGCCGATCGAGCAATCGGCCATTGAT TTCGTTGACGATTTGGTCTCTGCTCGCTGGATCGGTGCGCGTTCCTTTCTTGAACTGAGCTTTCAACAGGAGTTGAAACC ACAAGACTTGCAACGCAAGTGGACAAAACTCAATCGCGTCAGCGGTGGTTTCCAAAAGGTGAAAGATGCAATTGTTGCCA GCCAAGGAGGGGAACAGCAGCTGGTTCTAGTGACCATTGAGTTTGGCGATTTAACAGACAACCTTTTTGTCATTTTCAAC AGTCAAGGGGAGATCATCAACGTGGATTTCTCAGCTGATCTGGTCTGA
Upstream 100 bases:
>100_bases ACCCAGGCCACGATCGTCATCCTTGTGGCCCTCCAGGACCCCATTGCCAAGTGGTGACCATGACACTGCAGCTCAATGGA TCCAAGTTGAGGTTTTTGTC
Downstream 100 bases:
>100_bases TTGATCAGCGTTCGCTGATTCAACTGCTCTCTCTGGTGCTCAGTCTGCCCTTGCGGTCCATGAATCGACCTAAGCTCCCG GCCATTGATGTCTTTGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MELRQNRFRFAPRVLKLSVCLLSLSLGLPMGLSALTLPIVAAQETIQKTTLSPAEATKTAQILLKALVVQDAKTIYGQLS EALRSTTTTERIQQRLKRRPQVKSSRIVDVSPGIDDTTVDAMVETIDGDVPLIMVLDQEGKLIAWKWSGQALPIEQSAID FVDDLVSARWIGARSFLELSFQQELKPQDLQRKWTKLNRVSGGFQKVKDAIVASQGGEQQLVLVTIEFGDLTDNLFVIFN SQGEIINVDFSADLV
Sequences:
>Translated_255_residues MELRQNRFRFAPRVLKLSVCLLSLSLGLPMGLSALTLPIVAAQETIQKTTLSPAEATKTAQILLKALVVQDAKTIYGQLS EALRSTTTTERIQQRLKRRPQVKSSRIVDVSPGIDDTTVDAMVETIDGDVPLIMVLDQEGKLIAWKWSGQALPIEQSAID FVDDLVSARWIGARSFLELSFQQELKPQDLQRKWTKLNRVSGGFQKVKDAIVASQGGEQQLVLVTIEFGDLTDNLFVIFN SQGEIINVDFSADLV >Mature_255_residues MELRQNRFRFAPRVLKLSVCLLSLSLGLPMGLSALTLPIVAAQETIQKTTLSPAEATKTAQILLKALVVQDAKTIYGQLS EALRSTTTTERIQQRLKRRPQVKSSRIVDVSPGIDDTTVDAMVETIDGDVPLIMVLDQEGKLIAWKWSGQALPIEQSAID FVDDLVSARWIGARSFLELSFQQELKPQDLQRKWTKLNRVSGGFQKVKDAIVASQGGEQQLVLVTIEFGDLTDNLFVIFN SQGEIINVDFSADLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28252; Mature: 28252
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRQNRFRFAPRVLKLSVCLLSLSLGLPMGLSALTLPIVAAQETIQKTTLSPAEATKTA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH QILLKALVVQDAKTIYGQLSEALRSTTTTERIQQRLKRRPQVKSSRIVDVSPGIDDTTVD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH AMVETIDGDVPLIMVLDQEGKLIAWKWSGQALPIEQSAIDFVDDLVSARWIGARSFLELS HHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH FQQELKPQDLQRKWTKLNRVSGGFQKVKDAIVASQGGEQQLVLVTIEFGDLTDNLFVIFN HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEC SQGEIINVDFSADLV CCCCEEEEECCCCCC >Mature Secondary Structure MELRQNRFRFAPRVLKLSVCLLSLSLGLPMGLSALTLPIVAAQETIQKTTLSPAEATKTA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH QILLKALVVQDAKTIYGQLSEALRSTTTTERIQQRLKRRPQVKSSRIVDVSPGIDDTTVD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH AMVETIDGDVPLIMVLDQEGKLIAWKWSGQALPIEQSAIDFVDDLVSARWIGARSFLELS HHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH FQQELKPQDLQRKWTKLNRVSGGFQKVKDAIVASQGGEQQLVLVTIEFGDLTDNLFVIFN HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEC SQGEIINVDFSADLV CCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA