| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cocE [H]
Identifier: 33862715
GI number: 33862715
Start: 498267
End: 499910
Strand: Direct
Name: cocE [H]
Synonym: PMT0442
Alternate gene names: 33862715
Gene position: 498267-499910 (Clockwise)
Preceding gene: 33862714
Following gene: 33862716
Centisome position: 20.67
GC content: 55.41
Gene sequence:
>1644_bases ATGTGCGTTGAAGGTCTAACGAGCTCTGGATCCGTGAACTGGCACGATGCCTGGCTGACACTCTCTGACGGGGTCAAGCT CGTTGCCAGGTTATGGATCCCGAAAGGTGAGGGACCCTGGCCTGCTCTCGTGATGCGTCAGCCCTACGGACGTGCGCTCG CCTCAACTGTGACTTACATCCATCCTGGTTGGTGGGCAAGTCACGGCTATCTGGTCGTGGTCCAGGACGTACGTGGTCAA GGGGATTCCGAAGGCCACTTCAATGGCTTCCTGCAAGAAGCTTCTGATACCAGTCAGACGCATGCATGGGTTCGGGAGTT ACCAGAATGCAATGGCCGCCTTGGAACCTATGGGTTTTCCTATCAGGGCCTAACACAGCTGCTTGCCGAACCTGGGACGC CGCCACCGGATTGTCTGGCACCAGCGATGGCAGGAGTTGATGAGCGCAACCATTGGAGTTGTGAGGGGGGTGCTCACTGG TGGCATCTTGGCTTGGCCTGGGGGCTGCAACTTGCAGCACTACAAGCTCGTCGCTGTGGCAACTGGGAAGCATGGAGAGA GCTTCGCCGCAGTTTGGAAGACGACAGCTACCTGTATGAGGGGCCGGCACTTCTGAAACGCCACGATCCCGATGGGATGA GCTTTAGATGGCTACATCAAGCGAACCAAAACGATCACGGCTGGGTTGTACACAAGCCCTTGGATTCCTGGCTTCGTCAA CCGATGCTGCTTCTGGGTGGCTGGTGGGATCCCCATTTGAATGGCCTGCTTGATCTCTATCAACGATCAAGCCAAGTAGG TGGTAGCCCAGAACTTCATATCGGTCCAGCGACTCACCTGCAGTGGTGGCCTGATGCACAGCAACTTCAGCTGGAGTTCT TTGATCGCCATCTGAAATCTTCGAAAGCCTTAACTAATTCAAGACCCCATGGGCGGATCTGGAATATCACGTCTTGTTCT TGGCAGACATTTGCAAGCCCCACCCAGACCACAACATCAGCCAATGCCAGCTGGAGTCTTGTCAGTGGAGGGATGGCCTG CTTGGACCCCTCAGAAGGCACCCTGCATCAGAACAAGAAAGGTGGCGGCGTGGTTTATGTGGTTCATGACCCTTGGCGAC CGGTTCAATCAGTGGGAGGACATCTCAGCCCAAAACCAGGAGTTGCTGAGCGCAGCGCCTTGGACCAGCGCGCCGATGTG GCTACCTTCACAAGCACTGCTTTGCAGGAACCTCTCCAACTCAATGGGATCCCATTACTGCAGCTGACCGTGCAGTCAGA TCAACCGGGATTTGACCTTTGCGTTGCCCTCTCCATTGTTAATTGCAACCACAGCGAGGTGAAGCAGCTCTCAACAGGTT TTCTGCGTGTGCAAGGAGAGCAGGCCCTGCGCATGCTGCCGCGCAAGGTGAAACTTCAACCAATACTTGCAGACCTGGAG CGAGGAGAACATCTGCGCCTATCTCTCGCAGGTGCAGCCTGGCCGGCCATTGGTGTCAACCCAGGCCACGATCGTCATCC TTGTGGCCCTCCAGGACCCCATTGCCAAGTGGTGACCATGACACTGCAGCTCAATGGATCCAAGTTGAGGTTTTTGTCAT GGAACTCCGGCAAAATAGATTTCGATTTGCCCCAAGAGTTTTGA
Upstream 100 bases:
>100_bases TATTCATCTCAAGCGATCTCAGAAGTTGCCCGCCAACGCAATCTCAGCTCCAATAACGCTGAGATTCTGGCCACCTATGT GATTGGAATGAACTGCCCGG
Downstream 100 bases:
>100_bases AGCTGTCTGTTTGCCTGCTGAGCCTATCCCTTGGATTGCCTATGGGCCTGAGTGCACTAACCCTTCCGATTGTGGCAGCG CAGGAGACCATTCAAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MCVEGLTSSGSVNWHDAWLTLSDGVKLVARLWIPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSFRWLHQANQNDHGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLKSSKALTNSRPHGRIWNITSCS WQTFASPTQTTTSANASWSLVSGGMACLDPSEGTLHQNKKGGGVVYVVHDPWRPVQSVGGHLSPKPGVAERSALDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVALSIVNCNHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPILADLE RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRFLSWNSGKIDFDLPQEF
Sequences:
>Translated_547_residues MCVEGLTSSGSVNWHDAWLTLSDGVKLVARLWIPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSFRWLHQANQNDHGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLKSSKALTNSRPHGRIWNITSCS WQTFASPTQTTTSANASWSLVSGGMACLDPSEGTLHQNKKGGGVVYVVHDPWRPVQSVGGHLSPKPGVAERSALDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVALSIVNCNHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPILADLE RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRFLSWNSGKIDFDLPQEF >Mature_547_residues MCVEGLTSSGSVNWHDAWLTLSDGVKLVARLWIPKGEGPWPALVMRQPYGRALASTVTYIHPGWWASHGYLVVVQDVRGQ GDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFSYQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHW WHLGLAWGLQLAALQARRCGNWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSFRWLHQANQNDHGWVVHKPLDSWLRQ PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLKSSKALTNSRPHGRIWNITSCS WQTFASPTQTTTSANASWSLVSGGMACLDPSEGTLHQNKKGGGVVYVVHDPWRPVQSVGGHLSPKPGVAERSALDQRADV ATFTSTALQEPLQLNGIPLLQLTVQSDQPGFDLCVALSIVNCNHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPILADLE RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRFLSWNSGKIDFDLPQEF
Specific function: Hydrolyzes cocaine to benzoate and ecgonine methyl ester, endowing the bacteria with the ability to utilize cocaine as a sole source of carbon and energy for growth, as this bacterium lives in the rhizosphere of coca plants [H]
COG id: COG2936
COG function: function code R; Predicted acyl esterases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha/beta hydrolase family. Carboxylesterase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005674 - InterPro: IPR008979 - InterPro: IPR013736 - InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15; PF08530 PepX_C [H]
EC number: NA
Molecular weight: Translated: 60646; Mature: 60646
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVEGLTSSGSVNWHDAWLTLSDGVKLVARLWIPKGEGPWPALVMRQPYGRALASTVTYI CCCCCCCCCCCCEEEEEEEECCCCHHEEHHHCCCCCCCCCCEEEEECCCHHHHHHHHEEE HPGWWASHGYLVVVQDVRGQGDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFS CCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHWWHLGLAWGLQLAALQARRCG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC NWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSFRWLHQANQNDHGWVVHKPLDSWLRQ CHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHHCC PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLKS CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHH SKALTNSRPHGRIWNITSCSWQTFASPTQTTTSANASWSLVSGGMACLDPSEGTLHQNKK HHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCC GGGVVYVVHDPWRPVQSVGGHLSPKPGVAERSALDQRADVATFTSTALQEPLQLNGIPLL CCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEE QLTVQSDQPGFDLCVALSIVNCNHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPILADLE EEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCEEEECCHHHHHHCCHHHEHHHHHHHHC RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRFLSWNSGKID CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEE FDLPQEF CCCCCCC >Mature Secondary Structure MCVEGLTSSGSVNWHDAWLTLSDGVKLVARLWIPKGEGPWPALVMRQPYGRALASTVTYI CCCCCCCCCCCCEEEEEEEECCCCHHEEHHHCCCCCCCCCCEEEEECCCHHHHHHHHEEE HPGWWASHGYLVVVQDVRGQGDSEGHFNGFLQEASDTSQTHAWVRELPECNGRLGTYGFS CCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC YQGLTQLLAEPGTPPPDCLAPAMAGVDERNHWSCEGGAHWWHLGLAWGLQLAALQARRCG HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC NWEAWRELRRSLEDDSYLYEGPALLKRHDPDGMSFRWLHQANQNDHGWVVHKPLDSWLRQ CHHHHHHHHHHCCCCCEEECCCHHHCCCCCCCCCEEEEECCCCCCCCEEEECCHHHHHCC PMLLLGGWWDPHLNGLLDLYQRSSQVGGSPELHIGPATHLQWWPDAQQLQLEFFDRHLKS CCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHH SKALTNSRPHGRIWNITSCSWQTFASPTQTTTSANASWSLVSGGMACLDPSEGTLHQNKK HHHHCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCC GGGVVYVVHDPWRPVQSVGGHLSPKPGVAERSALDQRADVATFTSTALQEPLQLNGIPLL CCCEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEE QLTVQSDQPGFDLCVALSIVNCNHSEVKQLSTGFLRVQGEQALRMLPRKVKLQPILADLE EEEEECCCCCCEEEEEEEEECCCHHHHHHHHCCEEEECCHHHHHHCCHHHEHHHHHHHHC RGEHLRLSLAGAAWPAIGVNPGHDRHPCGPPGPHCQVVTMTLQLNGSKLRFLSWNSGKID CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEE FDLPQEF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10698749; 11742345; 12369817 [H]