| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yajQ [C]
Identifier: 161350043
GI number: 161350043
Start: 1386712
End: 1387206
Strand: Reverse
Name: yajQ [C]
Synonym: PMT1298
Alternate gene names: 161350043
Gene position: 1387206-1386712 (Counterclockwise)
Preceding gene: 33863567
Following gene: 33863565
Centisome position: 57.54
GC content: 50.51
Gene sequence:
>495_bases ATGGCGACCTATTCCTTTGATGTTGTCTCGGACTTTGATCGCCAGGAGTTGGTGAATGCGTTGGATCAGGTCCGTCGGGA TGTTGGACAGCGCTACGACCTTAAGGATTCAAATACTGAGATCGAGTTAACAGAGAGCGAAGTGTTGATCACCACTGCTA GCGATATGACGCTGCAGGCAGTAGAGGACGTGCTGCGAGCTAAGGCCACCAAACGCAACCTCTCACTCAAAATCTTCGAT TTTCAGACGCCGGAGGCGGTTGGTGGCAGCCGGGTGAAGCAGGTGGTGAGGCTGCGCAAGGGTTTAAGCCAGGAGATCGC CAAGAAGTTGAGTAAGTCCGTGCGCGATGAGCTCAAGAAGGTGACCGTGGCGATTCAAGGAGAGAGTTTGCGGATCACCG GCAAAAACAAGGATGATCTGCAAGCAGCGATTCAGTTAGTCAAAAGCAAGGAAGATGATTTAGATGTGCCGCTTCAATTT GAAAATTATCGATAA
Upstream 100 bases:
>100_bases AAGAATCCTGAGTCTTTCGCTCATACGAGCAAGATCAGGCCGAGTTGGACCTGGTCTTGCTGAGATGTTGGGTAGGTTGA GCTCAGAACCGTTTCTAGAT
Downstream 100 bases:
>100_bases TAAAACACTCTTGCGAATGTTGCTGTGTGTATAGTAGTGGCAGTAAAATTCTTGTTTAAGTATTAGACGTGAATCATTCG AAGGGGTCGAAGATATTTAA
Product: nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MATYSFDVVSDFDRQELVNALDQVRRDVGQRYDLKDSNTEIELTESEVLITTASDMTLQAVEDVLRAKATKRNLSLKIFD FQTPEAVGGSRVKQVVRLRKGLSQEIAKKLSKSVRDELKKVTVAIQGESLRITGKNKDDLQAAIQLVKSKEDDLDVPLQF ENYR
Sequences:
>Translated_164_residues MATYSFDVVSDFDRQELVNALDQVRRDVGQRYDLKDSNTEIELTESEVLITTASDMTLQAVEDVLRAKATKRNLSLKIFD FQTPEAVGGSRVKQVVRLRKGLSQEIAKKLSKSVRDELKKVTVAIQGESLRITGKNKDDLQAAIQLVKSKEDDLDVPLQF ENYR >Mature_163_residues ATYSFDVVSDFDRQELVNALDQVRRDVGQRYDLKDSNTEIELTESEVLITTASDMTLQAVEDVLRAKATKRNLSLKIFDF QTPEAVGGSRVKQVVRLRKGLSQEIAKKLSKSVRDELKKVTVAIQGESLRITGKNKDDLQAAIQLVKSKEDDLDVPLQFE NYR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=164, Percent_Identity=35.9756097560976, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18562; Mature: 18431
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYSFDVVSDFDRQELVNALDQVRRDVGQRYDLKDSNTEIELTESEVLITTASDMTLQA CCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCHHHHH VEDVLRAKATKRNLSLKIFDFQTPEAVGGSRVKQVVRLRKGLSQEIAKKLSKSVRDELKK HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VTVAIQGESLRITGKNKDDLQAAIQLVKSKEDDLDVPLQFENYR HEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEECCCC >Mature Secondary Structure ATYSFDVVSDFDRQELVNALDQVRRDVGQRYDLKDSNTEIELTESEVLITTASDMTLQA CCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCHHHHH VEDVLRAKATKRNLSLKIFDFQTPEAVGGSRVKQVVRLRKGLSQEIAKKLSKSVRDELKK HHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VTVAIQGESLRITGKNKDDLQAAIQLVKSKEDDLDVPLQFENYR HEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA