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The map label for this gene is insF1 [H]

Identifier: 30065576

GI number: 30065576

Start: 4524027

End: 4524608

Strand: Direct

Name: insF1 [H]

Synonym: S4630

Alternate gene names: 30065576

Gene position: 4524027-4524608 (Clockwise)

Preceding gene: 30065575

Following gene: 30065579

Centisome position: 98.36

GC content: 53.26

Gene sequence:

>582_bases
GTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACT
GACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTGCGTGACA
GCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGC
CCGCGGGCACGTAAAGGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGA
GCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCAC
GCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGG
CGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA
ATCACACGGCCTGGAGGGTTGA

Upstream 100 bases:

>100_bases
TATTAAAAAAAGCCGCGGCGTACTTCGCAAAGCTGTCCGACTGAGGTACGCCTTTATCCGTGACAACTCCTGTTGCTGGC
CTGTTCGCCTGCTCTGTCGG

Downstream 100 bases:

>100_bases
GGTGTACTGGCAATAGCGGACACTACCATTTGTTCTTTTTTTAAGCAGCCATCTGATGATATTTTTCCCTGAAGGCTGCC
GGGGAGATATTCCCCAGACG

Product: ISEhe3 orfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS
PRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEG

Sequences:

>Translated_193_residues
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS
PRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEG
>Mature_193_residues
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS
PRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEG

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=197, Percent_Identity=37.0558375634518, Blast_Score=124, Evalue=4e-29,
Organism=Escherichia coli, GI1788405, Length=196, Percent_Identity=39.7959183673469, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1787263, Length=196, Percent_Identity=39.7959183673469, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786753, Length=196, Percent_Identity=39.7959183673469, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786570, Length=196, Percent_Identity=39.7959183673469, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786490, Length=196, Percent_Identity=39.7959183673469, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789981, Length=186, Percent_Identity=35.4838709677419, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22559; Mature: 22559

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGV
CCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCCCH
NRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHE
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHEEEEEECC
GWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWRRNPEKQVLVHSDQGSQYTSH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
EWQSFLKSHGLEG
HHHHHHHHCCCCC
>Mature Secondary Structure
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGV
CCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCCCH
NRVWRLMKRVGIKAQVGYRSPRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHE
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHEEEEEECC
GWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWRRNPEKQVLVHSDQGSQYTSH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
EWQSFLKSHGLEG
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]