| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30065579
Identifier: 30065579
GI number: 30065579
Start: 4525870
End: 4526190
Strand: Direct
Name: 30065579
Synonym: S4633
Alternate gene names: NA
Gene position: 4525870-4526190 (Clockwise)
Preceding gene: 30065576
Following gene: 30065581
Centisome position: 98.4
GC content: 44.24
Gene sequence:
>321_bases GTGTTATTCGATCATCTTCGCGATGAAGTTATGCGCCTGGACGCAGGGATCACGCAGGAAGTATTGAAGCTATATATTGC GTTTAAAGCGGAAACGAATTTTGTTGATGTTGTGCCGCAAAAAAGCCGACTGCGATTGTCGCTTAATATGCAGTTTCATG AACTGGTCGATCCGAAAGGTATTGCCAAAGATGTGACAAATGTTGGGCGCTGGGGTAATGGCGATGTAGAAATTGGTTTC AGCGACCTCGCACAACTTCCTTACATTATGGGATTAATTCGTCAGGCATTTGAAAAACAGATGGAGAGCGCGTTGGTATA A
Upstream 100 bases:
>100_bases GAACTCTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCC GTTAAACTCAGGCTACCTCA
Downstream 100 bases:
>100_bases CGCGGCGAATAATACCCGGTAGCACTGGCGCTACCGGGTCAATGTATCAGGCGACTTTCTGTTTACCTGTAATTACCCCA ATAAATTCCTGTACCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGF SDLAQLPYIMGLIRQAFEKQMESALV
Sequences:
>Translated_106_residues MLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGF SDLAQLPYIMGLIRQAFEKQMESALV >Mature_106_residues MLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGF SDLAQLPYIMGLIRQAFEKQMESALV
Specific function: Unknown
COG id: COG3586
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12081; Mature: 12081
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKG CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCHHHHHCCCCC IAKDVTNVGRWGNGDVEIGFSDLAQLPYIMGLIRQAFEKQMESALV HHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFDHLRDEVMRLDAGITQEVLKLYIAFKAETNFVDVVPQKSRLRLSLNMQFHELVDPKG CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCHHHHHCCCCC IAKDVTNVGRWGNGDVEIGFSDLAQLPYIMGLIRQAFEKQMESALV HHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]