Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is bax
Identifier: 30065145
GI number: 30065145
Start: 4056466
End: 4057290
Strand: Direct
Name: bax
Synonym: S4155
Alternate gene names: 30065145
Gene position: 4056466-4057290 (Clockwise)
Preceding gene: 30065142
Following gene: 30065149
Centisome position: 88.2
GC content: 47.64
Gene sequence:
>825_bases ATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGC GAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAAACAGGTAAGCAGTAAACAAGAGT ATTCTCGCAATAGTGCAAAGAGTAGTTCACTTCCTGATTTGCGAAAATACCCTTCCGGAACACCAAGGAAAAAGGCGTTT CTCCGGACCGTAATGCCTTACATTACCAGCCAAAATGCAGCCATTACTGCAGAACGTAACTGGCTGATTTCAAAACAGTA TCAGGGCCAATGGGCACCTGCTGAGCGTGCGCGTCTGAAAGACATCGCCAAACGCTACAAGGTGAAGTGGTCTGGTAATA CGCGAAAAATCCCGTGGAATACCTTGCTTGAACGCGTAGACATTATCCCTACCAGTATGGTGGCGACGATGGCTGCAGCA GAAAGCGGTTGGGGAACGTCGAAGCTGGCGCGCAACAATAACAATCTGTTCGGCATGAAATGCATGAAAGGACGTTGTAC CAATGCGCCGGGTAAAGTGAAAGGGTACTCACAGTTTAGTTCTGTCAAAGAATCGGTGAGCGCCTATGTCACTAACCTGA ATACGCACCCGGCTTACTCTTCGTTCCGTAAATCGCGTGCACAGCTGCGTAAAGCGGATCAGGAAGTGACTGCCACAGCG ATGATTCACAAGCTGAAGGGCTACTCGACCAAAGGGAAGAGTTATAACAACTACCTGTTCGCAATGTACCAGGATAACCA ACGGTTAATCGCGGCGCATATGTAA
Upstream 100 bases:
>100_bases GGTGCTCTTGACAGCTATTTTTGATATGATTTGAGATTCAACTCTCAAATTTGTGAAAAATATAAGGTGTTGGAATGATT AAATCCGACCAGGAGACCTG
Downstream 100 bases:
>100_bases TTTCATTTCCTCGAGCCTTATCTGATTTGTCGGTCGGATAAGGCTTTTGCTCGCATCAGGTGGCTGTGCTGAGTTCCCTG ATGTGACGCCGACAATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITAERNWLISKQYQGQWAPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM
Sequences:
>Translated_274_residues MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITAERNWLISKQYQGQWAPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM >Mature_274_residues MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF LRTVMPYITSQNAAITAERNWLISKQYQGQWAPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=274, Percent_Identity=99.6350364963504, Blast_Score=567, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 30852; Mature: 30852
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWAPAERARLK CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHH DIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMK HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEE CMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM HHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC >Mature Secondary Structure MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWAPAERARLK CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHH DIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMK HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEE CMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM HHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]