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The map label for this gene is yiaI

Identifier: 30065142

GI number: 30065142

Start: 4052061

End: 4052534

Strand: Direct

Name: yiaI

Synonym: S4152

Alternate gene names: 30065142

Gene position: 4052061-4052534 (Clockwise)

Preceding gene: 30065141

Following gene: 30065145

Centisome position: 88.1

GC content: 53.8

Gene sequence:

>474_bases
ATGAACCGGTTTATTATTGCGGATGCGACGAAATGTATCGGTTGCCGTACCTGTGAAGTGGCTTGCGCAGTGTCGCATCA
GGAGAATCAGGATTGCGCTGCGTTGTCACCAGACGAGTTTATTTCCCGTATTCGTGTCATTAAAGACCACAGCTGGACCA
CGCCAGTAGCCTGTCATCAGTGTGAAGATGCACCGTGCGCGAATGTCTGCCCTGTTGACGCGATAAGCCGCGAACATGGG
CATATTTTCGTTGAACAAACACGTTGCATTGGCTGTAAAAGCTGTATGCTGGCTTGCCCGTTTGGTGCGATGGAGGTCGT
TTCTTCGCGCAAAAAGGCGAGGGCGATTAAGTGCGATCTGTGCTGGCATCGGGAGACGGGGCCGGCCTGTGTTGAAGCCT
GCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACAGCAGCAGCCTGTTTGA

Upstream 100 bases:

>100_bases
GCTTTGGACAAGTGCCAAAACTTTAACATTTCCTTCGTTGGATCAAAGCAGTAGGGACGCGCTCTCTGGCACTCTGCTGT
TTTAGTGCAAAGGAATGATC

Downstream 100 bases:

>100_bases
AACGTTTTCCGGCGTTTCTCAACGCCGGAATAGTGCGCTTTGTTTATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTA
CAAATTCTTCCAAATTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTPVACHQCEDAPCANVCPVDAISREHG
HIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLQQQPV

Sequences:

>Translated_157_residues
MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTPVACHQCEDAPCANVCPVDAISREHG
HIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLQQQPV
>Mature_157_residues
MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTPVACHQCEDAPCANVCPVDAISREHG
HIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLQQQPV

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI2367245, Length=157, Percent_Identity=97.4522292993631, Blast_Score=310, Evalue=2e-86,
Organism=Escherichia coli, GI1789067, Length=168, Percent_Identity=59.5238095238095, Blast_Score=196, Evalue=4e-52,
Organism=Escherichia coli, GI1788811, Length=147, Percent_Identity=51.7006802721088, Blast_Score=144, Evalue=2e-36,
Organism=Escherichia coli, GI87082179, Length=156, Percent_Identity=46.7948717948718, Blast_Score=144, Evalue=3e-36,
Organism=Escherichia coli, GI87082180, Length=156, Percent_Identity=45.5128205128205, Blast_Score=138, Evalue=1e-34,
Organism=Escherichia coli, GI1789079, Length=181, Percent_Identity=40.3314917127072, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87082114, Length=190, Percent_Identity=34.2105263157895, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787872, Length=165, Percent_Identity=32.7272727272727, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI1787122, Length=163, Percent_Identity=31.9018404907975, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI226510944, Length=144, Percent_Identity=36.1111111111111, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1787963, Length=161, Percent_Identity=29.8136645962733, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI2367345, Length=173, Percent_Identity=31.2138728323699, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 17432; Mature: 17432

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
11.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
14.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTPVACHQ
CCEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHCC
CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL
CCCCCCCCCCCCHHCCCCCCEEEEECCCHHCHHHHHHCCCCCHHHHHHHHHHHCEEEEEE
CWHRETGPACVEACPTKALQCMDVEKVQRHRLQQQPV
EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTPVACHQ
CCEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHCC
CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL
CCCCCCCCCCCCHHCCCCCCEEEEECCCHHCHHHHHHCCCCCHHHHHHHHHHHCEEEEEE
CWHRETGPACVEACPTKALQCMDVEKVQRHRLQQQPV
EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]