Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yieL
Identifier: 30065032
GI number: 30065032
Start: 3926012
End: 3927187
Strand: Reverse
Name: yieL
Synonym: S4034
Alternate gene names: 30065032
Gene position: 3927187-3926012 (Counterclockwise)
Preceding gene: 30065033
Following gene: 30065031
Centisome position: 85.39
GC content: 50.34
Gene sequence:
>1176_bases ATGAATATAAAAATTGCTGCTTTAACGCTGGCTATTGCCAGCGGTATTTCTGCTCAGTGGGCCATAGCAGCGGATATGCC AGCCAGCCCGGCACCCACTATCCCGGTGAAACAGTATGTGACTCAGGTCAATGCCGATAACAGCGTGACCTTTCGCTACT TTGCCCCTGGGGCAAAAAATGTCTCTGTAGTGGTGGGTGTTCCGGTTCCGGACAATATTCACCCGATGACCAAAGACGAA GCAGGAGTCTGGTCGTGGCGCACACCTATCCTGAAAGGCAACCTGTACGAGTATTTTTTCAATGTTGATGGTGTACGCAG CATTGATACAGGCACCGCAATGACTAAGCCTCAGCGCCAGGTTAACTCCAGTATGATTCTGGTGCCAGGCAGTTATCTGG ATACGCGTTCTGTTGCGCATGGTGATTTGATCGCCATAACTTACCACTCCAACGCATTGCAATCTGAACGTCAGATGTAT GTCTGGACCCCGCCAGGATACACCGGCATGGGCGAGCCTTTGCCAGTGCTCTATTTCTATCACGGTTTTGGTGATACCGG ACGTTCCGCTATCGATCAGGGGCGTATCCCGCAAATCATGGATAACCTGCTGGCTGAAGGGAAAATTAAACCGATGCTGG TGGTGATCCCGGATACCGAAACCGATGCGAAGGGCATTATTCCCGAAGATTTCGTGCCTCAGGAAAGACGTAAAGTCTTT TATCCGCTGAATGCTAAAGCGGCAGATCGCGAACTGATGAACGATATTATCCCGCTGATTAGCAAGCGTTTTAGTGTCCG TAAAGATGCCGATGGTCGCGCGCTGGCAGGGCTTTCACAAGGCGGGTACCAGGCGCTGGTTTCCGGAATGAATCATCTGG AAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGGCTGAAC GATCCGGCAGCTATTAACCAGCAACTACGTAATTTTACTGTGGTCGTTGGTGATAAAGATGTCGTAACCGGCAAGGATAT CGCCGGGCTGAAAACTGAGCTTGAGCAGAAAAAAATTAAGTTTGATTACCAGGAATATCCCGGCCTGAACCATGAAATGG ATGTCTGGCGGCCTGCCTATGCAGCCTTCGTACAGAAATTTAAAATAAGGCATTAA
Upstream 100 bases:
>100_bases TGGATGGCTTCACCTTCGAAGACAATAAAGACGCCCAGTTTGCTGTCGGTGCCCAGGCTGAAATCTGGTGGTAATGGAAC TTAATGAAAGGAATATTACG
Downstream 100 bases:
>100_bases GATGAAATTAATCATTACCGAAGATTACCAGGAAATGAGCCGTGTCGCGGCACACCATCTGCTTGGTTATATGTCGAAGA CGCGTCGTGTTAACCTGGCA
Product: putative xylanase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDE AGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMY VWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF YPLNAKAADRELMNDIIPLISKRFSVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLN DPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIKFDYQEYPGLNHEMDVWRPAYAAFVQKFKIRH
Sequences:
>Translated_391_residues MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDE AGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMY VWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF YPLNAKAADRELMNDIIPLISKRFSVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLN DPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIKFDYQEYPGLNHEMDVWRPAYAAFVQKFKIRH >Mature_391_residues MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDE AGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMY VWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF YPLNAKAADRELMNDIIPLISKRFSVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLN DPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIKFDYQEYPGLNHEMDVWRPAYAAFVQKFKIRH
Specific function: Unknown
COG id: COG2382
COG function: function code P; Enterochelin esterase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693201, Length=387, Percent_Identity=98.9664082687339, Blast_Score=789, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR004193 - InterPro: IPR013783 - InterPro: IPR014756 [H]
Pfam domain/function: PF02922 CBM_48; PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 43050; Mature: 43050
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKN CCEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCC VSVVVGVPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQ EEEEEEECCCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCHHH VNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFY HCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE HGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF ECCCCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE YPLNAKAADRELMNDIIPLISKRFSVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLA EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCEE TFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIK EECCCEEECCCCCCCEEECCCCHHHHHHHCCEEEEECCCCEECCCCCHHHHHHHHHHHHE FDYQEYPGLNHEMDVWRPAYAAFVQKFKIRH ECHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKN CCEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCC VSVVVGVPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQ EEEEEEECCCCCCCCCCCCCCCCEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCHHH VNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFY HCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE HGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF ECCCCCCHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEE YPLNAKAADRELMNDIIPLISKRFSVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLA EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCEE TFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIK EECCCEEECCCCCCCEEECCCCHHHHHHHCCEEEEECCCCEECCCCCHHHHHHHHHHHHE FDYQEYPGLNHEMDVWRPAYAAFVQKFKIRH ECHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]