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The map label for this gene is yieC

Identifier: 30065033

GI number: 30065033

Start: 3927214

End: 3928791

Strand: Reverse

Name: yieC

Synonym: S4035

Alternate gene names: 30065033

Gene position: 3928791-3927214 (Counterclockwise)

Preceding gene: 30065034

Following gene: 30065032

Centisome position: 85.42

GC content: 45.44

Gene sequence:

>1578_bases
ATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAACGCCTTGAGTTATTAGAAAAAGC
GTTAAGAGAAACGCAAAGCGAACTCAAAAAGTATAAAGATGAAGAGAAGAAAAAATATACGCCAGCGACGGTGAATCGTA
GCGTAAGTACGAATGATCAAGGGTATGCCGCCAATCCGTTCCCGACCAGTAGTGCCGCAAAACCTGATGCTGTACTGGTC
AAAAATGAAGAGAAAAATGCCAGTGAGACAGGCTCGATTTATTCTTCCATGACTCTGAAAGATTTCAGTAAGTTTGTGAA
AGATGAAATTGGCTTTAGTTACAACGGCTATTACCGTTCTGGTTGGGGGACCGCCTCTCATGGTTCACCTAAATCATGGG
CGATTGGTTCTCTGGGCCGCTTTGGTAACGAATACTCCGGCTGGTTTGATTTGCAGTTAAAACAACGTGTCTACAACGAA
AACGGCAAACGGGTTGATGCCGTTGTGATGATAGATGGTAACGTTGGTCAGCAGTACTCTACCGGCTGGTTTGGCGATAA
TGCCGGTGGCGAGAACTTTATGCAGTTCTCCGATATGTACGTTACCACCAAAGGTTTCCTGCCCTTTGCGCCAGAGGCTG
ATTTCTGGGTGGGTAAACACGGTGCGCCGAAAATTGAAATCCAGATGCTGGACTGGAAAACGCAGCGTACTGATGCTGCA
GCGGGTGTAGGTCTGGAAAACTGGAAAGTCGGTCCGGGTAAAATTGATATCGCGCTGGTTCGCGAAGATGTCGATGATTA
CGATCGCAGCCTGCAAAACAAACAGCAGATTAATACCCATACTATTGATTTACGCTATAAAGATATCCCGTTATGGGATA
AAGCGACCTTAATGGTGAGTGGTCGTTATGTCACGGCAAACGAAAGCGCATCGGAAAAAGATAATCAGGATAATAACGGG
TATTATGACTGGAAAGATACCTGGATGTTCGGCACATCTTTAACGCAGAAATTTGATAAAGGTGGCTTCAACGAATTCTC
CTTCCTGGTTGCGAATAACTCTATCGCCAGGAACTTTGGCCGTTATGCTGGCGCAAGTCCATTTACCACCTTTAATGGTC
GTTATTATGGTGATCACACCGGCGGAACAGCAGTTCGTCTGACCTCGCAGGGCGAAGCCTATATCGGCGATCATTTTATT
GTGGCTAACGCGATTGTTTACTCCTTCGGTAACAATATTTATAGCTACGAAACAGGCGCACACTCTGATTTCGAATCTAT
TCGTGCGGTTGTTCGCCCGGCCTATATTTGGGACCAATATAACCAGACAGGTGTTGAACTGGGCTATTTCACCCAGCAAA
ACAAAGATGCGAATAGTAATAAATTTAATGAGTCTGGTTATAAAACCACGCTCTTCCATACCTTTAAAGTCAATACCAGT
ATGTTGACCTCGCGTCTGGAAATTCGTTTCTACGCCACGTATATCAAAGCCCTGGAAAACGAACTGGATGGCTTCACCTT
CGAAGACAATAAAGACGCCCAGTTTGCTGTCGGTGCCCAGGCTGAAATCTGGTGGTAA

Upstream 100 bases:

>100_bases
CGCATTCAGAACAGTCTGGATGCGATACGTTAATTCTTTCTTTGCACCATAAAGGGATATTATGTTTAGACAAAATCTTA
TTACCTCTGCCATCTTATTA

Downstream 100 bases:

>100_bases
TGGAACTTAATGAAAGGAATATTACGATGAATATAAAAATTGCTGCTTTAACGCTGGCTATTGCCAGCGGTATTTCTGCT
CAGTGGGCCATAGCAGCGGA

Product: putative receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLV
KNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNE
NGKRVDAVVMIDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAA
AGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTHTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNG
YYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIARNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFI
VANAIVYSFGNNIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTS
MLTSRLEIRFYATYIKALENELDGFTFEDNKDAQFAVGAQAEIWW

Sequences:

>Translated_525_residues
MAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLV
KNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNE
NGKRVDAVVMIDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAA
AGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTHTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNG
YYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIARNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFI
VANAIVYSFGNNIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTS
MLTSRLEIRFYATYIKALENELDGFTFEDNKDAQFAVGAQAEIWW
>Mature_524_residues
APLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVK
NEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNEN
GKRVDAVVMIDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAA
GVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTHTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNGY
YDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIARNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIV
ANAIVYSFGNNIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSM
LTSRLEIRFYATYIKALENELDGFTFEDNKDAQFAVGAQAEIWW

Specific function: May be a sugar porin with a broad carbohydrate specificity (Potential) [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790157, Length=525, Percent_Identity=98.6666666666667, Blast_Score=1070, Evalue=0.0,
Organism=Escherichia coli, GI1790469, Length=462, Percent_Identity=24.8917748917749, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- InterPro:   IPR021570
- ProDom:   PD008788 [H]

Pfam domain/function: PF11471 DUF3205; PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 59157; Mature: 59026

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC
GYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRS
CEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
GWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMIDGNVGQQYS
CCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEHHHHHCCCCCEEEEEEEEECCCCCCCC
TGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAA
CCCCCCCCCCCCHHEECCEEEEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHH
AGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTHTIDLRYKDIPLWDKATLMVS
HCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEE
GRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIARNFG
CEEEECCCCCCCCCCCCCCCEECCCCCEEECCHHHHHHCCCCCCCEEEEEECCHHHHHHH
RYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNNIYSYETGA
HHCCCCCCEEECCEEECCCCCCEEEEEECCCCEEECCEEHHHHHHHHHHCCCEEEECCCC
HSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHH
MLTSRLEIRFYATYIKALENELDGFTFEDNKDAQFAVGAQAEIWW
HHHHHHEEEHHHHHHHHHHHHHCCCEECCCCCCEEEECCCEEECC
>Mature Secondary Structure 
APLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCC
GYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRS
CEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
GWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMIDGNVGQQYS
CCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEHHHHHCCCCCEEEEEEEEECCCCCCCC
TGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAA
CCCCCCCCCCCCHHEECCEEEEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCHH
AGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTHTIDLRYKDIPLWDKATLMVS
HCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEE
GRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIARNFG
CEEEECCCCCCCCCCCCCCCEECCCCCEEECCHHHHHHCCCCCCCEEEEEECCHHHHHHH
RYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNNIYSYETGA
HHCCCCCCEEECCEEECCCCCCEEEEEECCCCEEECCEEHHHHHHHHHHCCCEEEECCCC
HSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTS
CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHH
MLTSRLEIRFYATYIKALENELDGFTFEDNKDAQFAVGAQAEIWW
HHHHHHEEEHHHHHHHHHHHHHCCCEECCCCCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA