| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30064820
Identifier: 30064820
GI number: 30064820
Start: 3680500
End: 3680751
Strand: Reverse
Name: 30064820
Synonym: S4828
Alternate gene names: NA
Gene position: 3680751-3680500 (Counterclockwise)
Preceding gene: 30064823
Following gene: 30064819
Centisome position: 80.03
GC content: 35.71
Gene sequence:
>252_bases ATGACGGGAACAGTATATAAATTATTTGGTAATCGCTTACTCAACGCCCGCAATCAGTTAGATAAAAATCTCCTCGAAAT GGCTATGCAAATGGTTTATGGCAAAGATATGGTGACAAAGTCCGGGGATATATTGATTGATATACAATTAAATAAGGATG GCAGTCTCCAGAGTAAGCACTACACACTTGATGTAGGTGAAGTTATAAACAGTTATAATATTGACCCTCTTTGTGAATGC TTCAAGTATTAA
Upstream 100 bases:
>100_bases CAGCATTACCGGTTTGTCGAGTAATAATGAATATGACCTGTTTAAAAATAGAGAAACCTCACTGTGGAAACGCAAAGTAC CAGAAAGCGCAGCGCTGGCA
Downstream 100 bases:
>100_bases TCAAACTTACTTACATGATAAAAATCCTGGTGACGTTATTAGCCTGTATGGCACTTTAGATAACATTCCCCTTGTAGTTA AGGAATGCACGGGTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTGTVYKLFGNRLLNARNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKHYTLDVGEVINSYNIDPLCEC FKY
Sequences:
>Translated_83_residues MTGTVYKLFGNRLLNARNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKHYTLDVGEVINSYNIDPLCEC FKY >Mature_82_residues TGTVYKLFGNRLLNARNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKHYTLDVGEVINSYNIDPLCECF KY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9482; Mature: 9351
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTVYKLFGNRLLNARNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCE YTLDVGEVINSYNIDPLCECFKY EEEEHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure TGTVYKLFGNRLLNARNQLDKNLLEMAMQMVYGKDMVTKSGDILIDIQLNKDGSLQSKH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCE YTLDVGEVINSYNIDPLCECFKY EEEEHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA