| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yiiD
Identifier: 30064823
GI number: 30064823
Start: 3682136
End: 3683125
Strand: Reverse
Name: yiiD
Synonym: S3786
Alternate gene names: 30064823
Gene position: 3683125-3682136 (Counterclockwise)
Preceding gene: 30064824
Following gene: 30064820
Centisome position: 80.08
GC content: 54.95
Gene sequence:
>990_bases ATGAGCCAGCTTCCAGGGTTGTCACGGGAAACAAGAGAGAGTATCGCTATGTATCACCTTCAGGTTCCACAAACAGAAGA AGAGTTAGAGCGTTACTATCACTTTCGCTGGGAAATGTTGCGTAAGCCCCTGCATCAACCAAAAGGTTCGGAACGCGACG CGTGGGATGCGATGGCGCATCACCAGATGGTCGTCGACGAGCAGGGTAATCTGGTGGCGGTAGGCCGATTGTATATTAAT GCCGACAATGAAGCGTCCATTCGCTTTATGGTCGTTCACCCGGACGTGCAGGACAAAGGGTTAGGAACGCTGATGGCGAT GACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTTTTCG CCAAGCTGGGGTTTGTTAATCAGGGAGAAATCACCACGCCAACCACCACGCCGATTCGCCATTTTTTGATGATTAAGCCC GTCGCCACTCTGGATGATATTTTGCATCGCGGCGACTGGTGCGCGCAGCTGCAACAGGCGTGGTACGAACATATCCCGCT TAGTGAAAAAATGGGCGTGCGTATTCAACAATATACCGGGCAAAAATTTATCACCACCATGCCGGAAACCGGCAATCAGA ATCCGCACCATACGCTGTTTGCCGGGAGTTTATTCTCGCTGGCGACGCTCACCGGTTGGGGGCTTATCTGGCTGATGCTG CGTGAACGCCACCTCGGCGGAACGATTATTCTGGCGGATGCGCATATCCGCTACAGCAAACCGATTAGCGGTAAACCCCA TGCGGTAGCCGACCTTGGTGCCTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGG TCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCG TATGAAGAGGGCGGGAACGAAGAAGAGTAG
Upstream 100 bases:
>100_bases GCTGCCGCCAGCAAGAGATGAACACGCAAACAGGACGCTTCGCTGCCGATATGCAGGTATCGCTGGTCAATGATGGCCCC GTGACATTCTGGTTGCAGGT
Downstream 100 bases:
>100_bases CTTATGGAGAGGGGCGGTGCTGCCTCTCTCATTCATTCCGGTCATTTACATCAGTCCCTGACTATTCCGGTTATATTGAA TAAGAACTTTATAAATTTTT
Product: putative acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSQLPGLSRETRESIAMYHLQVPQTEEELERYYHFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGRLYIN ADNEASIRFMVVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKP VATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLML RERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAKPFGP YEEGGNEEE
Sequences:
>Translated_329_residues MSQLPGLSRETRESIAMYHLQVPQTEEELERYYHFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGRLYIN ADNEASIRFMVVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKP VATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLML RERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAKPFGP YEEGGNEEE >Mature_328_residues SQLPGLSRETRESIAMYHLQVPQTEEELERYYHFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGRLYINA DNEASIRFMVVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPV ATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLR ERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAKPFGPY EEGGNEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790321, Length=329, Percent_Identity=99.0881458966565, Blast_Score=679, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR012660 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF09500 YiiD_Cterm [H]
EC number: NA
Molecular weight: Translated: 37104; Mature: 36973
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLPGLSRETRESIAMYHLQVPQTEEELERYYHFRWEMLRKPLHQPKGSERDAWDAMAH CCCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HQMVVDEQGNLVAVGRLYINADNEASIRFMVVHPDVQDKGLGTLMAMTLESVARQEGVKR HEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE VTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQA EECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCHHHHHHHHHCCHHHHHHHHH WYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLML HHHHCCCCHHHCCEEEEECCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDE HHHCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEEEEECCC TPGAVFEGTYIVLPAKPFGPYEEGGNEEE CCCCEEECEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SQLPGLSRETRESIAMYHLQVPQTEEELERYYHFRWEMLRKPLHQPKGSERDAWDAMAH CCCCCCCHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HQMVVDEQGNLVAVGRLYINADNEASIRFMVVHPDVQDKGLGTLMAMTLESVARQEGVKR HEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE VTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQA EECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEECCHHHHHHHHHCCHHHHHHHHH WYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLML HHHHCCCCHHHCCEEEEECCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDE HHHCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHCCCHHHHHCCCCEEEEEEEEEECCC TPGAVFEGTYIVLPAKPFGPYEEGGNEEE CCCCEEECEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]