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The map label for this gene is cfaC [H]

Identifier: 30064438

GI number: 30064438

Start: 3226785

End: 3228776

Strand: Reverse

Name: cfaC [H]

Synonym: S3342

Alternate gene names: 30064438

Gene position: 3228776-3226785 (Counterclockwise)

Preceding gene: 30064449

Following gene: 30064437

Centisome position: 70.2

GC content: 47.84

Gene sequence:

>1992_bases
ATGGACAACCGCACACTATTTAATGCACAAGGCGGGAACTTTACCTTTAACTTTCTGCCACTCGGTGCAATCGATGGGAT
GCGTATCGGGTCGACACTGAGCTATTTAAACCAGGCGCAAAGCCAGCAAGGAACCCCAGTAATGGTTCTGCTTTCGCGCA
ATTCTCGTGTTGACGCTTATCGTAATGAGCAACTTTTGGGATCGTTTTATCTCAATAGTGGTTCGCAATTTATTGATACC
AGTTCCTTTCCGCCAGGCAGCTACAGCGTGGCATTAAAAGTCTACGAAAATAACCAACTCACCCGCACCGAGCTTGTGCC
GTTTACCAAAACCGGCGGTCTGACTGACGGAAATGCGCAATGGTTCTTACAGGCAGGTAAAACTACATCACAGGTTTCTG
ATGATGAAAGTTCAGCTTATCAGCTAGGAGTACGCCTGCCATTACATCCGCAATATGAGCTCTACGCAGGGCTGGCGAAT
GCTGATGATGTGAGTGCTTTCGAGTTAGGTAATAACTGGACGGCAGATTTAGGCAGGGTGGGGAATCTTGCAATCAGCGC
CAGCGTGTTCCGTAACGATGACGGCGGCAAAGGTGATATGCAACAGGCCAACTGGAGTAATCCGGGATGGCCGACGTTGG
GCTTTTATCGGACCAACTCTGACGGCGATGCTTGTACAACCGACAGCAGAGAGAGCTATAACGCCTTAAGCTGTTATGAA
AGTATTTCCGCGACAGTTTCACTGAATTTTGTCGGCTGGAATATGATGCTGGGTTATACCTGCACACAAAATAACACTGA
TGATAGTTTGCGTTGGGATAAACAGCAGAGCTTTGAAAATAACTATCTTCGCCAGACAACAGCGCAAAGTATCTCTGAAA
CTGTACAACTTAGCGCTTCCCGCGCTATTGTGATGCGTGACTGGATTTTGAGTACGTCAGTCGGTGTTTTCCATCGTAAT
GACAACGGTGGCGATAACGACGACAACGGCTTGTACTTATCGTTTTCGTTATCTGACACGCCAACGATGGATAGCAATAA
CAACAGCCATTCAACCAATGTGCCTACGGATTATCGTTATAGCGAACAGGATGGCGATCAAACGTCATGGCAGTTATCGC
ATACCTTTTATAACGATTCATTCAGCCATAAAGAACTTGGCGTAACCGTCGGAGGCCTGAACACCGATACCATAAACAGC
GCGGTTAACGGGCGTTGGGATGGGCAATACGGAAATGTCTACGCTACCGTATCTGATAGTTATGACCGTAAGAATCATGA
TCATCTTTCGGCCTTTACGGGCACTTATAGCTCTACGCTGGCTGTCAGTCGCTATGGCGTTAATTTGGGAGCCAGTGGTA
CAGACGATTTGCTGGGTGCGGTACTGGTGGATGTGAAAGGCTTCTCTGAACAGGATGAAGAGAGTCAGGATCTGCAACTC
GAAGCGCGGGTGGCAGGCAGCCGAACTTTGCAGCTTGGTCAAAGTGACAGTGTGTTGTTCCCTTATCCTGGATTTCAGTC
TGGTTTTGTTGAGGTTAACGACAGTAGCCAGGGCAATCAGCAGGGGACAACAAACATCATTAACGGTGCAGGGAATCGTG
AATTAATGTTGTTGCCTGGCAAGCTGCGCTATCGCGAAGTGTCTGCCAGCTTTAACTACAACTATATCGGTCGTTTATTA
CTGCCGGCAGCGGTGAAAAAATTCCCGATTGTGGGGCTGAACAGCGCCATGTTACTGGTAGCTGAAGATGGCGGATTTAC
ACTTGAAATTAACGGCAGCGAAAAAGAGCTCTATCTGCTTTCCGGGCAGCAATTCCTTAAGTGTCCACTGAGTGTTGTAA
AGAAACGCGCCAGCATTCGTTACAGCGGAGATGTTACTTGTAGTGTGGTGACTTATTCACAATTACCGGAGTCGATTCAG
GTTCAGGCACAGTTGAAACAGCCTAAATTACGTGGAAACGTTCAGACGGCGCAAAGGGAGGTTGCACCATGA

Upstream 100 bases:

>100_bases
CGGTTATGATGCAGATGATGTCAGTGACAGTAATACTGACGTCAGCGATCTCTATTATCGTTATGATTTTTTACGTCGTT
ATTATGTGCAGGCGGGTCGC

Downstream 100 bases:

>100_bases
GAAATCGATTGATTGCGGCGATATTGGGCTTGTTTGGCACGCTCACTGGCGTTCAGGCAGCTCCTGACGTGACCAGTGAA
ATTACGTATGATTTGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Colonization factor antigen I subunit C [H]

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYRNEQLLGSFYLNSGSQFIDT
SSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQWFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLAN
ADDVSAFELGNNWTADLGRVGNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYE
SISATVSLNFVGWNMMLGYTCTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSASRAIVMRDWILSTSVGVFHRN
DNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVPTDYRYSEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINS
AVNGRWDGQYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQL
EARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLL
LPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQQFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQ
VQAQLKQPKLRGNVQTAQREVAP

Sequences:

>Translated_663_residues
MDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYRNEQLLGSFYLNSGSQFIDT
SSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQWFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLAN
ADDVSAFELGNNWTADLGRVGNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYE
SISATVSLNFVGWNMMLGYTCTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSASRAIVMRDWILSTSVGVFHRN
DNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVPTDYRYSEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINS
AVNGRWDGQYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQL
EARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLL
LPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQQFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQ
VQAQLKQPKLRGNVQTAQREVAP
>Mature_663_residues
MDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYRNEQLLGSFYLNSGSQFIDT
SSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQWFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLAN
ADDVSAFELGNNWTADLGRVGNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYE
SISATVSLNFVGWNMMLGYTCTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSASRAIVMRDWILSTSVGVFHRN
DNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVPTDYRYSEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINS
AVNGRWDGQYGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQL
EARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLRYREVSASFNYNYIGRLL
LPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQQFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQ
VQAQLKQPKLRGNVQTAQREVAP

Specific function: May serve as anchor for the fimbriae in the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential). Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72644; Mature: 72644

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAY
CCCCEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
RNEQLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQ
CCCEEEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCCEEEEEECEEECCCCCCCCCCE
WFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLANADDVSAFELGNNWTADLGRV
EEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHEEEECCCCCCCEEEECCCCCCCCCCCC
GNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYE
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHH
SISATVSLNFVGWNMMLGYTCTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSAS
CCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAIVMRDWILSTSVGVFHRNDNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVPTDYRY
EEEEEEEEHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
SEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDS
CCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHCCCCEECCCCCCEEEEECCC
YDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQL
CCCCCCCHHHHCCCCCCCEEEEEEECEECCCCCCHHHHHEEEEEECCCCCCCCCCCCEEE
EARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPG
EEEECCCEEEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEECC
KLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLL
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCEEEEECCCCCEEEEE
SGQQFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQVQAQLKQPKLRGNVQTAQRE
CCCHHHHCHHHHHHHHHCEEECCCEEEEEEEHHHCCCCEEEEEEECCCCCCCCHHHHHHC
VAP
CCC
>Mature Secondary Structure
MDNRTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAY
CCCCEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
RNEQLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQ
CCCEEEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCCEEEEEECEEECCCCCCCCCCE
WFLQAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLANADDVSAFELGNNWTADLGRV
EEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHEEEECCCCCCCEEEECCCCCCCCCCCC
GNLAISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYE
CCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHH
SISATVSLNFVGWNMMLGYTCTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSAS
CCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RAIVMRDWILSTSVGVFHRNDNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVPTDYRY
EEEEEEEEHHHCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
SEQDGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDS
CCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHCCCCEECCCCCCEEEEECCC
YDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQL
CCCCCCCHHHHCCCCCCCEEEEEEECEECCCCCCHHHHHEEEEEECCCCCCCCCCCCEEE
EARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPG
EEEECCCEEEEECCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEECC
KLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLL
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCEEEEECCCCCEEEEE
SGQQFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQVQAQLKQPKLRGNVQTAQRE
CCCHHHHCHHHHHHHHHCEEECCCEEEEEEEHHHCCCCEEEEEEECCCCCCCCHHHHHHC
VAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2569152; 1352712 [H]